SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7990

Length: 616 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene7990

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	2-phosphoglycerate kinase-related protein [Arabidopsis thaliana] dbj\|BAB10097.1\| unnamed protein product [Arabidopsis thaliana] gb\|AAO22756.1\| unknown protein [Arabidopsis thaliana] gb\|AAO42372.1\| unknown protein [Arabidopsis thaliana] gb\|AED97374.1\| 2-ph	-	-	84%
FL-Next	tr=Predicted protein; subsp. trichocarpa).	-	-	74%
Blast2go	uncharacterized protein ddb_g0273453 ddb_g0273565-like	-	-	91%

Source	GOs	Term	Type	e value	Identity
Blast2go	myo-inositol hexakisphosphate biosynthetic process	GO:0010264	Biological Process	0.0	91%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 15)

Position	A %	C %	G %	T %	Probability
403	88	11			0.923564
405	88	11			0.923564
471	83			16	0.994512
472	83			16	0.994512
479			83	16	0.994512
480	83			16	0.994512
481		83	16		0.994512
482	60		20	20	0.99255
483	60	20	20		0.99255
487			25	75	0.996473
488		25		75	0.996473
489		25		75	0.996473
493			25	75	0.996473
498	75		25		0.996473
500	75	25			0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain