SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7857

Length: 771 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene7857

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	DUF538 domain containing protein	-	-	2.0e-27	35%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	uncharacterized protein loc100245914	-	-	0.0	85%

Source	InterPros	Term	Type	e value	Identity
Sma3	Protein of unknown function DUF538	IPR007493	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
723		81		18	0.999994
742		11		88	0.923564
745	87		12		0.992554
746	12			87	0.992554
749	14			85	0.993533
757		66	33		1.0
773	33			66	0.997452
774	33			66	0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
229	240	AGA AGA AGA AGA	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain