SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7788

Length: 1594 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene7788

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glycosyltransferase n=1 Tax=Lycium barbarum RepID=B6EWX9_LYCBA	-	-	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	udp-glycosyltransferase 85a2	-	-	68%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	0.0	68%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	68%
Blast2go	N-Glycan biosynthesis	00510	68%
Blast2go	Mucin type O-Glycan biosynthesis	00512	68%
Blast2go	Various types of N-glycan biosynthesis	00513	68%
Blast2go	Other types of O-glycan biosynthesis	00514	68%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	68%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	68%
Blast2go	Lipopolysaccharide biosynthesis	00540	68%
Blast2go	Peptidoglycan biosynthesis	00550	68%
Blast2go	Glycerolipid metabolism	00561	68%
Blast2go	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	68%
Blast2go	Sphingolipid metabolism	00600	68%
Blast2go	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	68%
Blast2go	Glycosphingolipid biosynthesis - globo series	00603	68%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	68%
Blast2go	Carotenoid biosynthesis	00906	68%
Blast2go	Zeatin biosynthesis	00908	68%
Blast2go	Flavonoid biosynthesis	00941	68%
Blast2go	Anthocyanin biosynthesis	00942	68%
Blast2go	Flavone and flavonol biosynthesis	00944	68%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	68%
Blast2go	Betalain biosynthesis	00965	68%
Blast2go	Biosynthesis of type II polyketide products	01057	68%
Blast2go	Metabolic pathways	01100	68%
Blast2go	Biosynthesis of secondary metabolites	01110	68%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	68%
Blast2go	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	68%

Source	InterPros	Term	Type	Identity
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQW4

Fln msg:

Fln protein: MASRDHAVMFPYPAEGHIRPMMQLAKILYSRGFYITFVNTDYVQERLVRSGSESVKSHPGDFRFETIPDDLPADHGRTLKIDELSESLINNGPLHFDKLIDKLKHLQPEVPPVTCIISDGVLSFTQKTARKLRVPRVAFWTPSACGFSAYFFVPLLIDRGYVPLKDESCFTNGYMEEIVSCIPGMAPLHVRDLPSFFQVTESTKDYMFNYLRTEGQASLEADMVILNTFDELEGPVLDALRIRLPSLYTVGPLLHAAERDENRKSHLSDSLWAEETDCVKWLNSQEPSSVIYVCFGSITVISDKELVEFAWGLEASKQPFVWGIRPDLIHGRSAVLPPEFLEKVKDRSFLVSWAPQIKVLSHPSVGGFLTHSGWNSTLESIYAGVPMISWPFFAEQQTNRRFVSEVWKIGMEMNEVVRREDVEKMVRMLMRGEEGRQMKMRIERLRDAMFRAVGKGGSSYNNKEEFIQKLQKGLPII*

Protein Length: 479

Fln nts: CGTCGTGACCTTGGCGTCACTCATGTTAATGCATCACTGAATTTGCTCTCTCTGGCTCTGAGAATCGGCTCTCTTCTGTGTTCGTGAAGTACGTCGATACCACT_-_ATGGCGAGCCGAGATCATGCTGTCATGTTCCCTTATCCCGCTGAGGGTCACATTAGGCCCATGATGCAGCTTGCCAAAATCTTGTATTCTCGAGGCTTTTATATCACCTTCGTTAACACCGACTATGTACAAGAGCGGTTGGTTAGGTCCGGATCTGAGTCCGTGAAATCTCACCCGGGGGACTTCAGATTCGAAACTATACCAGACGACCTGCCTGCGGATCATGGCCGGACCCTCAAAATAGATGAGTTATCTGAGTCCTTGATTAATAATGGCCCTCTGCATTTCGACAAGCTGATTGACAAGTTGAAGCATTTGCAACCAGAAGTTCCTCCCGTGACATGTATTATTTCCGATGGGGTTCTTTCGTTTACGCAGAAAACCGCGAGGAAGCTGAGAGTTCCCAGGGTAGCTTTCTGGACGCCCAGCGCTTGTGGCTTCTCTGCTTATTTCTTCGTGCCTCTTCTCATTGACAGAGGTTATGTTCCTCTCAAAGATGAGAGCTGTTTTACAAATGGATACATGGAAGAAATAGTGAGCTGCATTCCTGGAATGGCCCCGCTGCATGTCAGAGATCTTCCCAGCTTCTTCCAAGTCACAGAATCTACCAAAGATTACATGTTTAACTATCTGAGAACCGAAGGACAGGCTTCACTGGAAGCCGACATGGTAATACTCAATACCTTTGATGAACTCGAGGGCCCTGTACTCGACGCACTAAGGATCAGACTCCCATCGTTGTATACTGTAGGCCCTCTTTTACACGCAGCAGAACGTGATGAGAATCGAAAATCCCATCTGTCTGACAGCTTATGGGCCGAAGAGACGGACTGTGTGAAATGGTTGAACAGTCAGGAACCGTCTTCAGTTATTTATGTTTGCTTTGGAAGTATCACTGTCATATCTGACAAGGAGCTCGTGGAGTTCGCGTGGGGGTTAGAGGCGAGCAAGCAGCCCTTCGTGTGGGGTATTCGTCCAGATCTGATTCATGGTCGCTCTGCTGTTCTGCCTCCCGAGTTTTTGGAGAAGGTGAAGGACAGAAGTTTCTTGGTGAGCTGGGCTCCTCAGATTAAAGTGCTCTCACATCCTTCAGTCGGAGGCTTTCTGACTCACAGTGGCTGGAACTCCACGCTGGAGAGCATATATGCAGGTGTGCCCATGATATCGTGGCCCTTCTTTGCAGAGCAGCAGACTAACAGGAGATTCGTTAGTGAAGTGTGGAAGATTGGGATGGAGATGAATGAAGTTGTGAGGAGAGAAGACGTTGAGAAAATGGTGAGAATGTTGATGAGAGGGGAAGAAGGGCGGCAAATGAAGATGAGAATTGAGAGATTGAGAGATGCAATGTTCAGAGCAGTGGGAAAAGGAGGATCTTCTTACAATAACAAGGAGGAGTTTATTCAAAAATTGCAGAAGGGTCTCCCCATTATTTGA___TTCGATATGTTCAGTAACTTTTCTCGTGATCGCGTTGAATAATTTTTCTTCTGTTA

Fln Alignment:

Contig7788___SRDHAVMFPYPAEGHIRPMMQLAKILYSRGFYITFVNTDYVQERLVRSGS-ESVKSHPGDFRFETIPDDLPADHGRTLKIDELSESLINNGPLHFDKLIDKLKHLQPEVPPVTCIISDGVLSFTQKTARKLRVPRVAFWTPSACGFSAYFFVPLLIDRGYVPLKDES-CFTNGYMEEIVSCIPGMAPLHVRDLPSFFQVTESTKDYMFNYLRTEGQASLEADMVILNTFDELEGPVLDALRIRLPSLYTVGPLLHAAERDENRKSHLSDSLWAEETDCVKWLNSQEPSSVIYVCFGSITVISDKELVEFAWGLEASKQPFVWGIRPDLIHGRSAVLPPEFLEKVKDRSFLVSWAPQIKVLSHPSVGGFLTHSGWNSTLESIYAGVPMISWPFFAEQQTNRRFVSEVWKIGMEMNEVVRREDVEKMVRMLMRGEEGRQMKMRIERLRDAMFRAVGKGGSSYNNKEEFIQKLQKGL
B8LQW4______________TRPHALMLPFPSQGHIQAMMQLSKLLYARGFYITFVNTEYIQERLEASGSVDSVKSWP-DFRFETLPDGLPPEHGRTSKLAELCRSFADNGPLHFEKLIDKLKHSQPDVPPITCIISDGVVSFPQKTARKLAVPRVSFWTHSACGFCAYFFAPLLVGKGLIPGKDDDRCLTNGCMEQIITCIPGMPPLRVKDLPTSLRHKD-----MLEIVTSEAQAALEADLVLLNTFDELDRPILDALLKRLPALYTIGPLVLQAESGNDRVSGISASLWTEETGCVEWLDCQKPYSVIYVCFGSVAVMSDQELLELAWGLEASKQPFLWVIRPDLIHGDSAVLPSEFLEKVKDRSFLVKWAPQMKVLTHRSVGGFLTHSGWNSTLESICAGVPMISWPFLAEQPTNRRFVSGVWNIGMAMNEVVRREDVEDMVRRLMSGEEGRRMRKRIGELRDESMRAVGKGGSSYNNTEKFLKEIQMGL

SNPs (tot: 114)

Position	A %	C %	G %	T %	Probability
40		25		75	0.996473
42	50	25		25	0.995533
43	75	25			0.996473
44			25	75	0.996473
45		25		75	0.996473
46			25	75	0.996473
48		25	75		0.996473
51		50	25		0.995533
54		50	25	25	0.995533
55			25	75	0.996473
59			75	25	0.996473
61	25			75	0.996473
64		25	75		0.996473
66	25		75		0.996473
149		75		25	0.996473
167	25		75		0.996473
199		25		75	0.996473
200			25	75	0.996473
211		33		66	0.997452
241	66			33	0.997452
255		33		66	0.997452
258	33		66		0.997452
268			33	66	0.997452
270	66			33	0.997452
291		25	75		0.996473
304		75		25	0.996473
309		75		25	0.996473
313	75			25	0.996473
330		75		25	0.996473
362		50		50	1.0
374	50			50	1.0
382		50		50	1.0
424			75	25	0.996473
444	33			33	0.997753
448		75		25	0.996473
449		75	25		0.996473
450		75	25		0.996473
451		25	75		0.996473
454	75			25	0.996473
458		25	75		0.996473
459	25			75	0.996473
670		12	75		0.975346
681		57		42	1.0
682	42		57		1.0
686	57		42		1.0
726	50		50		1.0
739	50		50		1.0
758		50	50		1.0
759	50		50		1.0
768	50			50	1.0
835	60	40			1.0
837	40		60		1.0
1108		25	75		0.996473
1115		75	25		0.996473
1116	25			75	0.996473
1117		25	75		0.996473
1120			75	25	0.996473
1121			25	75	0.996473
1122			50	50	1.0
1126		75		25	0.996473
1128	50			50	1.0
1129		50		25	0.995533
1131		50		50	1.0
1132		25	75		0.996473
1137		33		66	1.0
1138			33	66	1.0
1140	16	33	50		1.0
1142	71			28	1.0
1145	71	28			1.0
1146	14	28	57		1.0
1147			71	28	1.0
1150	71		28		1.0
1151	71	28			1.0
1152			71	28	1.0
1154	71			28	1.0
1158	71	28			1.0
1159	71			28	1.0
1160		28	71		1.0
1161	28			71	1.0
1165			22	77	0.999999
1167		22	77		0.999999
1172		22	77		0.999999
1173	11	88			0.923564
1175			77	22	0.999999
1191			11	88	0.923564
1192	88		11		0.923564
1203	88		11		0.923564
1215		66	33		1.0
1226		25		75	1.0
1228	75			25	1.0
1231			16	83	0.999991
1232		76	23		1.0
1234		76		23	1.0
1235	76	23			1.0
1236			76	23	1.0
1243			76	23	1.0
1244	76	23			1.0
1249	7	69		23	1.0
1253		76		23	1.0
1268	23		76		1.0
1270	69			30	1.0
1276	30		69		1.0
1319	75	25			1.0
1327		78		21	1.0
1339			78	21	1.0
1340		30		69	1.0
1363	23			76	1.0
1384		78		21	1.0
1402	78		21		1.0
1453	72		27		1.0
1465	80		20		0.999996
1466	80		20		0.999996
1467		20		80	0.999996
1477	57	42			1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain