SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene7620

Length: 1045 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene7620

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	LEA_2 domain containing protein	-	-	3.0e-10	25%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	68%
Blast2go	uncharacterized protein at1g08160-like	-	-	0.0	57%

Source	GOs	Term	Type	e value	Identity
Blast2go	response to other organism	GO:0051707	Biological Process	0.0	57%

Source	InterPros	Term	Type	e value	Identity
Sma3		IPR010847	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
1042	20			80	0.995493
1045		33		66	0.997452

SSRs (tot: 2)

Start position	End position	Sequence	Length
16	31	GAG GAG GAG GAG GAG G	16
806	820	GAGAT GAGAT GAGAT	15

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain