SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6340

Length: 648 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene6340

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	inositol-1, 4, 5-trisphosphate 5-Phosphatase-like protein, putative [Oryza sativa Japonica Group]	-	-	4.0e-36	48%
FL-Next	Isoform 2 of Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 OS=Arabidopsis thaliana GN=CVP2	-	-	0.0	70%
Blast2go	type i inositol- -trisphosphate 5-phosphatase cvp2-like	-	-	4.2039e-45	60%

Source	GOs	Term	Type	e value	Identity
Blast2go	inositol or phosphatidylinositol phosphatase activity	GO:0004437	Molecular Function	4.2039e-45	60%

Source	InterPros	Term	Type	Identity
Sma3	Protease inhibitor I4, serpin	IPR000215	-	-
Sma3	Inositol polyphosphate-related phosphatase	IPR000300	-	-
Sma3	Phosphoglycerate/bisphosphoglycerate mutase, active site	IPR001345	-	-
Sma3	Carbohydrate/puine kinase, PfkB, conserved site	IPR002173	-	-
Sma3	YLP motif	IPR004019	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-
Sma3	Phosphoglycerate mutase 1	IPR005952	-	-
Sma3	TonB box, conserved site	IPR010916	-	-
Sma3	Histidine phosphatase superfamily, clade-1	IPR013078	-	-

Full-Lengther Next Prediction

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
136	80		20		0.995493
176		80	20		0.995493
178	80	20			0.995493
220		80	20		0.995493
234		80		20	0.995493
245			80	20	0.995493
251		40		60	1.0
274		20		80	0.995493
284		40	60		1.0
306		20		80	0.995493
308		80	20		0.995493
334	80		20		0.995493
347	66	33			0.997452
350		33	66		0.997452
372	66		33		0.997452
381	33	66			0.997452
405	66		33		0.997452
406	66			33	0.997452
411		66		33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain