SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6279

Length: 894 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene6279

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana] emb\|CAA18756.1\| putative protein [Arabidopsis thaliana] emb\|CAB80633.1\| putative protein [Arabidopsis thaliana] gb\|AEE87106.1\| heavy metal transport/detoxification domai	-	-	62%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	69%
Blast2go	metal ion binding	-	-	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion transport	GO:0030001	Biological Process	0.0	80%
Blast2go	metal ion binding	GO:0046872	Molecular Function	0.0	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	Heavy metal-associated domain, HMA	IPR006121	-	0.0	-
Sma3	Heavy-metal-associated, conserved site	IPR017969	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 8)

Position	A %	C %	G %	T %	Probability
60		66		33	0.997452
61		25		75	0.996473
122	12	87			0.992554
271	16		83		0.994512
274	83		16		0.994512
275	83		16		0.994512
276		83	16		0.994512
828	33		66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain