SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6259

Length: 1163 nt

Origin of reads: Biogeco1 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene6259

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Probable glutathione S-transferase n=1 Tax=Picea mariana RepID=O65056_PICMA	-	-	80%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	tau class glutathione s-transferase	-	-	78%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity	GO:0016740	Molecular Function	0.0	78%

Source	InterPros	Term	Type	Identity
Sma3	Glutathione S-transferase, C-terminal-like	IPR010987	-	-
Sma3	Glutathione S-transferase, N-terminal	IPR004045	-	-
Sma3	Glutathione S-transferase/chloride channel, C-terminal	IPR017933	-	-
Sma3	Glutathione S-transferase, C-terminal	IPR004046	-	-
Sma3		IPR012335	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P2I2

Fln msg:

Fln protein: MEACGEEVQVKLLGGSTSPYVLRVRIALALKGIHYEYIEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESMIIVQYIDETWDTRAPFLMPKDPYDRAIARFWAAFIDDKVLPCIRAVFKGQGEQCQKAVEETVANFLILEEAFRTNLCFSGKAYFGGDGIGFVDIALGGTLAFVRALEKGIDSVLIDTEKMPLLSAWMDRFCEADGVKEVMPDPVKLLEFICATRVKFASLPAAN*

Protein Length: 239

Fln nts: AATGGGGGTGTAATAGCAGTGAAAAAGCAGCCATTAGATTGCATACAATTCAATTTGAGAGATATCTGG_-_ATGGAGGCCTGTGGAGAGGAGGTGCAAGTGAAGCTGTTAGGTGGCAGTACAAGTCCCTATGTACTGCGGGTCCGCATAGCACTTGCTCTGAAAGGGATCCATTATGAGTATATCGAAGAGAATACTCAAAATAAGAGCGAGCTGCTGCTGAAATCGAATCCTGTCCACAAGAAGATACCTGTGCTAATCCACAATGGAAAGCCAGTTTGTGAGTCCATGATTATTGTGCAGTACATAGACGAGACGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCGTATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGGTGCTTCCATGCATTCGGGCAGTTTTCAAGGGCCAAGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACGGTGGCGAACTTTCTTATACTGGAGGAAGCTTTCCGAACGAACCTCTGTTTCTCGGGAAAAGCGTATTTCGGAGGAGATGGGATCGGTTTTGTTGACATCGCATTGGGTGGTACGTTAGCATTTGTCAGAGCGCTAGAGAAGGGTATTGATTCAGTTTTGATAGACACGGAGAAGATGCCGCTGTTAAGCGCATGGATGGATCGATTCTGTGAGGCCGATGGAGTGAAAGAAGTTATGCCCGATCCGGTCAAGCTGCTGGAATTTATATGCGCCACGAGAGTTAAATTTGCGTCCCTACCTGCTGCCAATTAG___GGGAAGTCATTCGGCCATTAAATTTAGAGGCTGTATTTAATTGGATATTATCCTCCACATTGTTTTTAATTTTATGTTGTCAGTTTTATTGATTGTAGGCTTTCTGAATCTTTGGTGTTCCATCAGTTTTCACTTTCTTCCATGTACATTGACTTCAGGGGGAAAGCAAAAGTTGCAGAAATGCCGTCTGATGAACTTTCCTAAAAATATTGTTCCCTTCATCCAGATTAAAGTGTTGCCTACTGTTTGGTATTCCATCTCCATCACTCACTCATCATCATTACTAGTTATTCCACTTTGACAAAATGAGCAATACTATTATTATTTTATTTTGTAAATATAAATAATTTTTGTACAAAAGGAGTGAGCAAAGAAAATTT

Fln Alignment:

Contig6259___MEACGEEVQVKLLGGSTSPYVLRVRIALALKGIHYEYIEENTQNKSELLLKSNPVHKKIPVLIHNGKPVCESMIIVQYIDETWDTRAPFLMPKDPYDRAIARFWAAFIDDKVLPCIRAVFKGQGEQCQKAVEETVANFLILEEAFRTNLCFSGKAYFGGDGIGFVDIALGGTLAFVRALEKGIDSVLIDTEKMPLLSAWMDRFCEADGVKEVMPDPVKLLEFICATRVKFASLPAAN
A9P2I2______________MEACGEEGQVKLLGASISPFVLRVRIALALKGIHYEFIEENLLNKSQLLLQSNPVHKKIPVLIHNGKPVCESMIIVQYIEEAWDSKAPNLMPKDPYDRAIARFWAAFVDDKLLPCVRGVFTGQGEQQQKAVEESVANFLVLEEALRTSLCFSGKPYFGGDEIGFVDIALGGMLAFVKALEKATNSVLIDVEKMPLLSAWMDRFCKADEVKEVMPDPAKLLEFIIAMKVRFASPPAAN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain