SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene6075

Length: 2400 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

>sp_v2.0_unigene6075
ATCGGGGTGAAACTCCACTCCAGTCGACTAAATTGGATTGATTGGTCGAGTTCGTTCGCGAACTTGTTTGAAGATTGATTGGATCAGGGAACAGAATTCGCAGAGCGCTGGAAGACAGGAGGAGCAGGTTACAATGGGGAATATGTGGTGGGTAGTTGCTGGACTGCTTAGCTTGCTCTTGTCAGGGTTGGAGGCAGAGTACATTCATGAATTTAGGCCCCACAATGATCACCCATTTGCACAAATTCAACTTGATAAGGCCTCTGTTGAAATAGACAGCTCTGCTCATATCTCAGCCAATCCCAGTGTTCTTGGTGTTCAGGGTGAAACTTATGAGTGGGTGACATTGAAATACAGCCGCTCTTCTCCTGCAGCAACTGATTGGATTGCTGTCTTTTCTCCAGCAAATTTCAATTCCTCAACCTGCACCCCAGAAAGTGGGCCAAACAAAGATCAGACCCCAATATTGTGCTCTGCACCTATAAAGTTCCAATATGCAAATTATTCAACAGTCAGTTACTCGAAGACAGGAAAAGGGTCATTGAAACTTCGATTGATCAATCAGCGAGCAGACTTTGCCTTTGCATTGTTTGCAGGCGGACTGTCTAACCCAAAATTGTTGGCGATTTCCAACACAATCAGTTTTGCAGACCCAAAAGCACCTCTTTATCCACGTCTTGCTCAGGGAGAGTTGTGGAATGAGATGTCAGTTACATGGACAAGTGGATATGGGATTGAGGAAGCAACACCTGTTGTTGAGTGGGGTTTTGTTGGAGAAAAGTCAAAGTTCCTGTCACCAGCTGGAACATTGACATACACCCGCAACATGATGTGTGGTCAACCTGCACGTACTGTTGGCTGGCGAGACCCTGGTTTCATACACACAAGTATTTTGAAGGATTTATGGCCAAACACTAAATACTACTACAAGATTGGACATAAGCCAGTCAATGGGTCATATATTTGGGGGCCACTGAATTATTTTAAAGCATCTCCATATCCTGGCCAGGACTCTTTGCAACGTGTAATCATCTATGGTGACATGGGGAAAGCGGAGCGTGATGGTTCTAATGCATATAGCAACTACCAACCAGGAACTCTAAATACTACTGATCGTCTGATAGAGGACTTAGAAAATATTGACATAGTGTTTCATATTGGAGATCTAGCTTACGCAAATGGTTACCTTTCACAATGGGATCAGTTTACAGCACAAATGGAGCCCATTGCTTCACGTGTTCCATACATGGTAGCCAGTGGCAACCATGAGCGCGATTGGCCTGATTCCAGTTCATTTTATAAGAACACAGATTCAGGTGGAGAATGTGGTGTGCCAGCTAAAACGACATTTCATCTGCCAACAACTAATGATGCTAAGATATGGTATTCCACCGACTATGGCATGTTCCATTTCTGTATTGCAGATTCAGAACTTGATTGGCAAGAAGAATCAGAACAATACAAATTTATTGAGCAATGTTTAGCATCTGCTGACAGACAAAAGCAACCATGGCTTATCTTTATTTCGCATCGAGTTCTTGGCTATTCCTCAAATTCATGGCTTGCTGTTCATGGAGCTTTTGAAGAGCCAATGGGAAGAGGGATTTACCAAAAACTTTGGCAGAAGTACAAGGTTGACATTGCTTTCTTTGGCCATGTTCACAACTATGAAAGATCATGCCCTGTTTATCAAAATTATTGTGTAAGTGACGAAAAGTCTCAGTATTCAGGAACCTTTAATGCCACAATTCATGTAGTTGCGGGTGGTGGAGGTAGTCATCTTTCCGACTATACTTCTCTAAACACCACTTGGAGCATTTTCAAAGATCAAGATTTTGGTTTTGTGAAGCTGACTGCCTTTAACCATTCGGCATTGTTGTTTGAGTACAAGAGAAGTTCAGATGGGAAAGTATATGATAAATTCTGGATTACAAGAGAGTACAAAGACATTCTTGGTTGTGATTCCATTGGTAACTGCCCATCTACTACTTTAGCTCAATAGACTGGGAAAACAATCACAAAGTCACATGGAAGACATAAATTCATAGATATTAATGGCTATTATTATTCTCAAGTTTGTTCAGCAGATTGCATATACTTGTTGGCTTTGCGTGGCTTCCATAATTCGGGCTGCATAAAAGAAGAAAAAAAGATGTTGTACACCATTCTTCTCAACTGGATTGTTCTATACTAAAGACAGATTGCAATAAGATGTTATAATGATAATAAAGACATAGATCCTAGCATATTTTCTTAAGTGTAAGCTGTTTTCCGGAGTGTTGTTATCTAGCTACCCAGATTTGTTCATTTAAGTGTTTTCTAACTCTTGGAAGAATATTAAAATTTTGAAATAGCTGTACTCTAGATTGGAGATTTTATAATGTTCAAAGTTCAAACTGC

Ace file of the UniGene sp_v2.0_unigene6075

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Hydrolase, putative n=1 Tax=Ricinus communis RepID=B9RED8_RICCO	-	-	66%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	36%
Blast2go	nucleotide pyrophosphatase phosphodiesterase	-	-	80%

Source	ECs	Term	Type	e value	Identity
Blast2go	Acid phosphatase.	EC:3.1.3.2	-	0.0	80%

Source	KEGGs	Term	Type	e value	Identity
Blast2go	Aminobenzoate degradation	00627		0.0	80%
Blast2go	Riboflavin metabolism	00740		0.0	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	metal ion binding	GO:0046872	Molecular Function	0.0	80%
Blast2go	acid phosphatase activity	GO:0003993	Molecular Function	0.0	80%

Source	InterPros	Term	Type	Identity
Sma3	Fibronectin, type III	IPR003961	-	-
Sma3	Metallophosphoesterase domain	IPR004843	-	-
Sma3	Purple acid phosphatase, N-terminal	IPR015914	-	-
Sma3		IPR017909	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQ97

Fln msg: your sequence is shorter than subject: 623 - 641

Fln protein: MGNMWWVVAGLLSLLLSGLEAEYIHEFRPHNDHPFAQIQLDKASVEIDSSAHISANPSVLGVQGETYEWVTLKYSRSSPAATDWIAVFSPANFNSSTCTPESGPNKDQTPILCSAPIKFQYANYSTVSYSKTGKGSLKLRLINQRADFAFALFAGGLSNPKLLAISNTISFADPKAPLYPRLAQGELWNEMSVTWTSGYGIEEATPVVEWGFVGEKSKFLSPAGTLTYTRNMMCGQPARTVGWRDPGFIHTSILKDLWPNTKYYYKIGHKPVNGSYIWGPLNYFKASPYPGQDSLQRVIIYGDMGKAERDGSNAYSNYQPGTLNTTDRLIEDLENIDIVFHIGDLAYANGYLSQWDQFTAQMEPIASRVPYMVASGNHERDWPDSSSFYKNTDSGGECGVPAKTTFHLPTTNDAKIWYSTDYGMFHFCIADSELDWQEESEQYKFIEQCLASADRQKQPWLIFISHRVLGYSSNSWLAVHGAFEEPMGRGIYQKLWQKYKVDIAFFGHVHNYERSCPVYQNYCVSDEKSQYSGTFNATIHVVAGGGGSHLSDYTSLNTTWSIFKDQDFGFVKLTAFNHSALLFEYKRSSDGKVYDKFWITREYKDILGCDSIGNCPSTTLAQ*

Protein Length: 624

Fln nts: ATCGGGGTGAAACTCCACTCCAGTCGACTAAATTGGATTGATTGGTCGAGTTCGTTCGCGAACTTGTTTGAAGATTGATTGGATCAGGGAACAGAATTCGCAGAGCGCTGGAAGACAGGAGGAGCAGGTTACA_-_ATGGGGAATATGTGGTGGGTAGTTGCTGGACTGCTTAGCTTGCTCTTGTCAGGGTTGGAGGCAGAGTACATTCATGAATTTAGGCCCCACAATGATCACCCATTTGCACAAATTCAACTTGATAAGGCCTCTGTTGAAATAGACAGCTCTGCTCATATCTCAGCCAATCCCAGTGTTCTTGGTGTTCAGGGTGAAACTTATGAGTGGGTGACATTGAAATACAGCCGCTCTTCTCCTGCAGCAACTGATTGGATTGCTGTCTTTTCTCCAGCAAATTTCAATTCCTCAACCTGCACCCCAGAAAGTGGGCCAAACAAAGATCAGACCCCAATATTGTGCTCTGCACCTATAAAGTTCCAATATGCAAATTATTCAACAGTCAGTTACTCGAAGACAGGAAAAGGGTCATTGAAACTTCGATTGATCAATCAGCGAGCAGACTTTGCCTTTGCATTGTTTGCAGGCGGACTGTCTAACCCAAAATTGTTGGCGATTTCCAACACAATCAGTTTTGCAGACCCAAAAGCACCTCTTTATCCACGTCTTGCTCAGGGAGAGTTGTGGAATGAGATGTCAGTTACATGGACAAGTGGATATGGGATTGAGGAAGCAACACCTGTTGTTGAGTGGGGTTTTGTTGGAGAAAAGTCAAAGTTCCTGTCACCAGCTGGAACATTGACATACACCCGCAACATGATGTGTGGTCAACCTGCACGTACTGTTGGCTGGCGAGACCCTGGTTTCATACACACAAGTATTTTGAAGGATTTATGGCCAAACACTAAATACTACTACAAGATTGGACATAAGCCAGTCAATGGGTCATATATTTGGGGGCCACTGAATTATTTTAAAGCATCTCCATATCCTGGCCAGGACTCTTTGCAACGTGTAATCATCTATGGTGACATGGGGAAAGCGGAGCGTGATGGTTCTAATGCATATAGCAACTACCAACCAGGAACTCTAAATACTACTGATCGTCTGATAGAGGACTTAGAAAATATTGACATAGTGTTTCATATTGGAGATCTAGCTTACGCAAATGGTTACCTTTCACAATGGGATCAGTTTACAGCACAAATGGAGCCCATTGCTTCACGTGTTCCATACATGGTAGCCAGTGGCAACCATGAGCGCGATTGGCCTGATTCCAGTTCATTTTATAAGAACACAGATTCAGGTGGAGAATGTGGTGTGCCAGCTAAAACGACATTTCATCTGCCAACAACTAATGATGCTAAGATATGGTATTCCACCGACTATGGCATGTTCCATTTCTGTATTGCAGATTCAGAACTTGATTGGCAAGAAGAATCAGAACAATACAAATTTATTGAGCAATGTTTAGCATCTGCTGACAGACAAAAGCAACCATGGCTTATCTTTATTTCGCATCGAGTTCTTGGCTATTCCTCAAATTCATGGCTTGCTGTTCATGGAGCTTTTGAAGAGCCAATGGGAAGAGGGATTTACCAAAAACTTTGGCAGAAGTACAAGGTTGACATTGCTTTCTTTGGCCATGTTCACAACTATGAAAGATCATGCCCTGTTTATCAAAATTATTGTGTAAGTGACGAAAAGTCTCAGTATTCAGGAACCTTTAATGCCACAATTCATGTAGTTGCGGGTGGTGGAGGTAGTCATCTTTCCGACTATACTTCTCTAAACACCACTTGGAGCATTTTCAAAGATCAAGATTTTGGTTTTGTGAAGCTGACTGCCTTTAACCATTCGGCATTGTTGTTTGAGTACAAGAGAAGTTCAGATGGGAAAGTATATGATAAATTCTGGATTACAAGAGAGTACAAAGACATTCTTGGTTGTGATTCCATTGGTAACTGCCCATCTACTACTTTAGCTCAATAG___ACTGGGAAAACAATCACAAAGTCACATGGAAGACATAAATTCATAGATATTAATGGCTATTATTATTCTCAAGTTTGTTCAGCAGATTGCATATACTTGTTGGCTTTGCGTGGCTTCCATAATTCGGGCTGCATAAAAGAAGAAAAAAAGATGTTGTACACCATTCTTCTCAACTGGATTGTTCTATACTAAAGACAGATTGCAATAAGATGTTATAATGATAATAAAGACATAGATCCTAGCATATTTTCTTAAGTGTAAGCTGTTTTCCGGAGTGTTGTTATCTAGCTACCCAGATTTGTTCATTTAAGTGTTTTCTAACTCTTGGAAGAATATTAAAATTTTGAAATAGCTGTACTCTAGATTGGAGATTTTATAATGTTCAAAGTTCAAACTGC

Fln Alignment:

Contig6075___SPAATDWIAVFSPANFNSSTCTP------ESGPNKDQTPILCSAPIKFQYA----NYSTVSYSK------------TGKGSLKLRLINQRADXXXXXXXXXXSNPKLLAISNTISFADPKAPLYPRLAQGELWNE-MSVTWTSGYGIEEATPVVEWGFVGEKSKFLSPAGTLTYTRNMMCGQ---PARTVGWRDPGFIHTSILKDLWPNTKYYYKIGHKPVNGSYIWGPLNYFKASPYPGQDSLQRVIIYGDMGKAERDGSNAYSNYQPGTLNTTDRLIEDLE--NIDIVFHIGDLAYANGYLSQWDQFTAQMEPIASRVPYMVASGNHERDWPDSSSFYKNTDSGGECGVPAKTTFHLPTTNDAKIWYSTDYGMFHFCIADSELDWQEESEQYKFIEQCLASADRQKQPWLIFISHRVLGYSSNSWLAVHGAFEEPMG---RGIYQKLWQKYKVDIAFFGHVHNYERSCPVYQNYCVSDEKSQYSG-------TFNATIHVVAGGGGSHLSDYTSLNTTWSIFKDQDFGFVKLTAFNHSALLFEYKRSSDGKVYDKFWITR
B8LQ97______________TPLASDWIAILSPYSVNDTYCPGVKRMYVETG-DIASLPLLCQYPLKFQFLLADPDYLTCKKKQCQRSIGRWCLWSTCSGTISARVVNIRTDIRIMFFGGGFDFPCILANSELLKFANPRAPLYGHLSSMDSSSTVMRLTWISGDGKPQ--------YVHYGDGKLALSTVATFTPNDLCDSFVSPAVDFGWHNPGFIHTALLDGLLPSKSYLYKYGSDEVG----WSTTTIFSTPPAVGSNQLT-FVTYGDMGKAERDGFGEHY-IQPGALQVIDAVEREVHAGKIDMILHIGDISYATGFLAEWDFFLEMIGPVASRVPYMTAIGNHERDFPKSGSYYEGPDSGGECGVPYEMYFQMPVNGKDKPWYSMEHGPVHFTIMSTEHPWDIGSDQFNWIKADLASVDRKRTPWLIFAGHRP-QYSSLEGGFIFSTIIPAVDVHFRLVIEPLLLFYQVDLALWGHVHNYERTCAVNNSQCLNYPMRDHGGIDNYKSSTYSAPVHVIIGMSGFELDSFITMTKSWSLVRISEFGYVKVHA-TTGKILVQFK-LPDGRIADQFSLSR

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
2251			20	80	0.995493

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain