SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene5974

Length: 5387 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Biogeco3 v1

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene5974
CGTCGTGACCTTGGCTGTCACTCAATTCCCGCACTTTCGCGCACTTTGCCGGCAACTTCAACAATTTTTTTTCAAAAGGCCATAACTTCTTCATCCGGAAGTCTTTTTCAGAGCCGTTTTTTAAAACAGCCTAATTTTTCGAGATCTATCCATTGGAACACTTACTTTCAGCATCTTCAGCTTCAGTTTTTTTAAAAATGGAAAGTCCATGCCAAGTCATTCTTGACGGCACTAACTTCTTTCAATGGGTATCCTACATGGAGGATTTACTTAGAAGTAAAGGTCTCTTCAGAATTGCCACAGGCCAAGAGACGAAACCAAAAGATGAAGACAAGGCTGCTAAATGGGAAAATAGACAAGATCAAGCACGTGGTTTGATAGGGATGTCTATTTCTCCAGATCTTAGATTCCATATTGCAGAACTTGATACTCCTAAAGAAGCTTTGGACAAACTTACTCAAGTTTTTGGGATTAAAAATGAAATTAGAGCCCATCAACTTGAAAATGAGTTGCTTACATTGGATCCTAATAATTTTTCTTGCATTGAAGATTTCTTGTCCAAATTCAAGACCCTTAGATATCTCTTGGAAGGTGTTAAGGTTAAGAAAGAAGATAGTAACCTTATTTATTCCATCCTTACTAAGTTGGGTCCAGCCTACTCTGTATTTGTTTCCACCTTCCATTCTACAAGGGAAGCTTTCATTTGTCAAGGAAAAGACTCATACAAGCCCCCTTCCTTTGACTCTTTTTGTGATTCTTTAATAAGAGAACAAGAAAAACTCTTACACCTTGGTCTTCTTAATCTTGGAAACTCTTCCAAGAAAGCGTTAGCCGCCCAGCAGCAACCAAATTCAAAGAATCCTAAGAAGTCATATCCTAAAAAGAATGGTCCTAAACCAAACAAGGGTCCTAAGCAAACTCAGCCTCAAAATGAAAGATCATTCCAGCAAAATGATAAGACCAATAAAAACAAATGGAAGAAGACTGATAGACATTGTAACTTTTGTAATCGAGATGGCCACTTAGAATCAAAATGCTTTAAAAAGATGGAAGCCTTGGAAGCAGCAATGAAGAAGCATAACATCCGTGTGGAGCATTCTTCAACTTCAACTTCAACTTCATCTTCTGGAATGGCACTTTCTGCATGTCGTTGTCAATCATCTCAGTCTGGTTATGCATTAAATGTATCTTCTTCTTCTCATTCTCATGAGTGGCTCATTGATTCTGGAGCTTCTTATCACATGGCCAAAAACAAAGCCATGTTTTCTTCTTTAAATGATTGTAACACCAAAAATATATATGTTGGTGATGATAGATCTCTTAATGTTGTAGGGACTGGAACTGTTCATCTAGACAATGGTCAGTTTAATGATGTATTATGTGTTCCAACCTTATCCTGCAACCTTCTATCTGTATATCAGATAACTCATTCAGGTGAAGGTAAAATTGTTGAATTTTCACCTCATGATGTTGTAATCAAGGATCTAAAAGATCCTAAACAGGTTCTAGCTACTGGTATTGCTGATGATTCCACAAGGTTGTATAAGTTTCACAACTTTGGGTCATCAAATCTTCCCTCAGTATTTGTTGCTCATAATGATGAAGTGAGCAAACTTTGGCATGAGCGATTTGGTCACTTAAACTATCGCTCCCTTCAGCATCTATGTAAAGAAAATATGGTGACAGGTCTTCCTATGGTATCTTGCAGAGATGGTGTTTGTTCCGGATGTGTACTCGGAAAACATCATCGGGACAGTTTTGAAAAACGTGCCTCTTGGCACGCCTCAGCCCCTTTACAGCTTGTGCATAGTGATTTATGTGGTCCACTTCCAGTTGTTTCATTCTCTGGCTGCAAGTATTTCTTAACTTTCATTGATGATTTCTCCAGACGCACTTGGGTATACTTCTTAAAACTCAAGAGTGAAGTATTTAACATATTTTTGGCCTTCAAGGCCTTTGTTGAAAAACAATCTGGACATCAAATTCTTAAGCTAAGATCTGATAATGGCGGAGAATATGTTAAAAACACATTCATCAACTTTTGCACTGAGAATGGAATTCAAATGCAACATACTGTTCCATACACTCCACAACAAAATGGTGTAGCTGAAAGGAAAAATCGCACCTTAAAGGAAATGGCTAATTGTATGCTGCAATCTAAAGGACTCAGTCTTAGTTTTTGGGCTGAAGCAATTAATTGTGCAAATTATATAATAAATCGCACTCCTACTAAGGTTCTAAAGAATATCACTCCAGAAGAAGCATGGAGTTCAATCAAACCAGATGTAAGTCACTTTCGTGTTTTTGGAAGTGAAGCATGGGCCCATATTCCAGATGAAAAGCATAAAGCTTTAGAACCTAAGAGTGAGAAATGTACTTTTGTTGGATATTCTGAAGATGTAAAAGGTTATAGACTTATTCCATTTAAGTCCAAAAATGTTATCATTAGAAGAGATGTAAAATTTGATGAAAATAAATCGGCCTGCGAGCCTAGTCCGGCGGATGTGCCACCTCTTCCTATCTCTTCTACTTTTGAAAACATTTCTTCTTCAGATGATGAAAGTGAGGATGACAATCCTCCCCCACCTTCTCAGGATCCTCCTTCAGCTCCTCAACTTCCAAGATGGGTCCGTGCCACTCGAGATGCAGCAGGTGATCTTGCCGGTGATCCTACAGATCAGCGCCGTACACGTTCTCAGTTTGAACGAGCCTCTTCTTTACTGGCTCAAGCTCCAGTAAATCATGATCCTGACACTTTTGCAGAAGCTTCAGGCCATCCAGATTGGGAAGCAGCTATGCATGAAGAATATCATTCATTGTTGGCAAATGATACATGGGATCTTGTTCCTCTACCAAAGGGACGAAAACTTGTAAGATGTAAATGGGTTTACAGAACCAAGTATGGGCCAGATGGCAAAGTTGATAAACATAAAGCTCGTCTTGTTGCTAAGGGCTTTTCACAGGTTGAAGGCATTGACTACACTGAAACCTTCTCCCCAGTTGCCAAAATGAACTCTATCCGCCTTGTTCTTTCCCTTGCTGCCTCTTTTAAATGGGAAGTCCATCAGATGGATGTTAAATCTGCCTTCTTGCATGGGGACTTGCATGAAGAAATCTATATGGAACAACCCATTGGCTTCATCCAAACAGACTCCAGCCTTGTATGTCGACTTAAGAAATCTCTTTATGGTCTCAAGCAAGCTCCTCGGGCTTGGTATGCCAAAATGGATAGCTTTCTTTTAGAATCTGGCTTTTCTAGGTGTCATTCTGACAATACTGTCTACACCAAGAAAGTGGGCAACTCTCTTATCATCCTTGTTCTTTATGTTGATGATCTTATCCTTACTGGTAGTGATCCCAACCTTATAAACCATGTGAAGTCCATCCTTAAAAAGAAATTTCAAATGACAGACTTAGGACACTTACACTATTTTCTCGGTCTTCAAGTCTTGCAATCCAAGGAGGGTATTTCCATTTCCCAGTCCAAGTATGCTTGTGATATTCTTCGTCATTTTCACATGGAAGACTGTAAGCCAGCTCCTTCTCCCTTTCAGTCTGGAGTCAAACTTTCAGTCTCTTGTACTTCTCCTGAAGTTGATGCTACCTTATACCGTCAACTTGTAGGAAAACTTTTGTATCTAACCCATACTCGTCCTGACCTTTCCTTTGTTGTTGGCCTTGTTGCTCGGTTTATGCAAAACCCCCGTGAAAGTCATTGGAAAGCAGCTAAAAGAATACTTCGTTATGTTCGAGGTACAGTTCAGTTTGGGATTCATTACAGTGCCGAAGCAGCTCCTCTATTGGTTGGTTTCACTGATTCTGATTGGGCTGGTGACCCTGATGATCGGAAGTCTACTGCCGGTTATGTCTTCACTCTTGGTTCAGGACCTATTACATGGGCTTGTAAGAAACAGGCTGCCATTTCTCTTTCGTCAGCAGAAGCAGAGTATCGTGGTGCCGTGGAAGCTAGTAAGGAAGCCTTGTGGCTTCGTCAGATCCTATCAGAGTTTGGCTTTGAGCAGCAGCATCCGACTACACTTTGGTGTGATAATCAAAGTGCCATTCAGCTATGCAAAGATCCAGTCCAGCATCAGCGCAGCAAACACATTGAACTACACATGCACTTCATCAGAAAGCTCATTTATGACCATGTTCTTGAAGTGCAATATTGTTCAACAGATGATCAGGTTGCAGACATCTTCACAAAGGCTCTCACAGAGGCGAAGTTCACTAAACTTCGATATATGCTTGGAGTTCAGGAAGTTGTCACTAAGGGGGGATAGGCTCTAGTGCCTCCTTCCTTCTCCTATTGTGTCATATTTGTAAATCCTTCAATCCTATCCCAAGTTGTTCTTAAGGGGGGATGTTAGGATATTCCGACACATAGGAATAGTTAAGTTCAACTTGGTCTAGTATAGAGTTAGGTATAGAGTTAGGTAAAGTGTGTTTCTTTACCGTTGTACATTACCGTTGTACACTTTGTAACTTACAATCCGACGGTCACGATATGTAGTGATCCGACGGTTCACTCTCACCTCGGTATTACCGACACTTGATCCGTGGCTTGACACCCGATTGGTCCATGAGTTCTATTTAAAGCGCATGGAGGGTCAGTGTTCGGGTAATCCGTGCATGAGAGAAAGCTTATGTAAATTTTCATTCTTTGATTAATAAATTGCCTGTAGTGCCCACGTTGGGACAGGCCGTGGACTGTTTCCCTCTTTGAGGGTTTTAACCACGTCAAAAATACTGGTGTATTGATTTGTGATCTGGTTGTGAGCGGTGTCCTTTTGGTATTCTTTCTGAGGAACTTACCCTGTAAATTCCTACATGGTATCAGAGCTATTTGAGGGCCGCGTCCGTTGGTGATCCAAATCTGAAGCCGGTAGAACTGCATGCGGCTGTCGTTTCCTAGATCTGCTGTTTCTGACTGCTTTCGGGCCGAGAGGACTGCTCTGTTGCGTTCGGAGCATCTGTTCCAGTGAGGAACCCCTTTCGTTTCGTGCGAAAAGGTTTCCGGTAGCCCTATCTGCGTCATTTTTCAGATCGGGAGGTATACTAGTTTTTTTTTGCAGTTTACTGTTATTTTCTCTCTGTTTATTTCGGTTTTGGTTTATTTAGCCCTTTTTTTTTTTGACCGGATCTATACCTTTCATTTCTGCGTATGCTCTTTGCCCTGCGACTCTGTGCGATCTGGGCAAATCAGAAACAGAAAGGAAGGATTTTTCTCATGCGTATGCTCTTTTCCCTGCACCTTAGTGTGATCTCGGAAAATCAGAAACATTGAGAAAAATATTTTAGTTTTTCGGCTAAAGCTAACTTTGAGATTTTTTTTAAAAATTTCTAGTTTTTTGGCTAAAGCTAACTTCGAGCCGCAAGGTTCGGTT

Ace file of the UniGene sp_v2.0_unigene5974 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH	-	-	0.0	43%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	55%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase S8/S53, subtilisin/kexin/sedolisin	IPR000209	-	-
Sma3	Integrase, catalytic core	IPR001584	-	-
Sma3	Zinc finger, CCHC-type	IPR001878	-	-
Sma3	Haem peroxidase, plant/fungal/bacterial	IPR002016	-	-
Sma3		IPR013084	-	-
Sma3	Reverse transcriptase, RNA-dependent DNA polymerase	IPR013103	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKX7

Fln msg: your sequence is longer than subject: 1362 - 407

Fln protein: MESPCQVILDGTNFFQWVSYMEDLLRSKGLFRIATGQETKPKDEDKAAKWENRQDQARGLIGMSISPDLRFHIAELDTPKEALDKLTQVFGIKNEIRAHQLENELLTLDPNNFSCIEDFLSKFKTLRYLLEGVKVKKEDSNLIYSILTKLGPAYSVFVSTFHSTREAFICQGKDSYKPPSFDSFCDSLIREQEKLLHLGLLNLGNSSKKALAAQQQPNSKNPKKSYPKKNGPKPNKGPKQTQPQNERSFQQNDKTNKNKWKKTDRHCNFCNRDGHLESKCFKKMEALEAAMKKHNIRVEHSSTSTSTSSSGMALSACRCQSSQSGYALNVSSSSHSHEWLIDSGASYHMAKNKAMFSSLNDCNTKNIYVGDDRSLNVVGTGTVHLDNGQFNDVLCVPTLSCNLLSVYQITHSGEGKIVEFSPHDVVIKDLKDPKQVLATGIADDSTRLYKFHNFGSSNLPSVFVAHNDEVSKLWHERFGHLNYRSLQHLCKENMVTGLPMVSCRDGVCSGCVLGKHHRDSFEKRASWHASAPLQLVHSDLCGPLPVVSFSGCKYFLTFIDDFSRRTWVYFLKLKSEVFNIFLAFKAFVEKQSGHQILKLRSDNGGEYVKNTFINFCTENGIQMQHTVPYTPQQNGVAERKNRTLKEMANCMLQSKGLSLSFWAEAINCANYIINRTPTKVLKNITPEEAWSSIKPDVSHFRVFGSEAWAHIPDEKHKALEPKSEKCTFVGYSEDVKGYRLIPFKSKNVIIRRDVKFDENKSACEPSPADVPPLPISSTFENISSSDDESEDDNPPPPSQDPPSAPQLPRWVRATRDAAGDLAGDPTDQRRTRSQFERASSLLAQAPVNHDPDTFAEASGHPDWEAAMHEEYHSLLANDTWDLVPLPKGRKLVRCKWVYRTKYGPDGKVDKHKARLVAKGFSQVEGIDYTETFSPVAKMNSIRLVLSLAASFKWEVHQMDVKSAFLHGDLHEEIYMEQPIGFIQTDSSLVCRLKKSLYGLKQAPRAWYAKMDSFLLESGFSRCHSDNTVYTKKVGNSLIILVLYVDDLILTGSDPNLINHVKSILKKKFQMTDLGHLHYFLGLQVLQSKEGISISQSKYACDILRHFHMEDCKPAPSPFQSGVKLSVSCTSPEVDATLYRQLVGKLLYLTHTRPDLSFVVGLVARFMQNPRESHWKAAKRILRYVRGTVQFGIHYSAEAAPLLVGFTDSDWAGDPDDRKSTAGYVFTLGSGPITWACKKQAAISLSSAEAEYRGAVEASKEALWLRQILSEFGFEQQHPTTLWCDNQSAIQLCKDPVQHQRSKHIELHMHFIRKLIYDHVLEVQYCSTDDQVADIFTKALTEAKFTKLRYMLGVQEVVTKGG*

Protein Length: 1363

Fln nts: CGTCGTGACCTTGGCTGTCACTCAATTCCCGCACTTTCGCGCACTTTGCCGGCAACTTCAACAATTTTTTTTCAAAAGGCCATAACTTCTTCATCCGGAAGTCTTTTTCAGAGCCGTTTTTTAAAACAGCCTAATTTTTCGAGATCTATCCATTGGAACACTTACTTTCAGCATCTTCAGCTTCAGTTTTTTTAAAA_-_ATGGAAAGTCCATGCCAAGTCATTCTTGACGGCACTAACTTCTTTCAATGGGTATCCTACATGGAGGATTTACTTAGAAGTAAAGGTCTCTTCAGAATTGCCACAGGCCAAGAGACGAAACCAAAAGATGAAGACAAGGCTGCTAAATGGGAAAATAGACAAGATCAAGCACGTGGTTTGATAGGGATGTCTATTTCTCCAGATCTTAGATTCCATATTGCAGAACTTGATACTCCTAAAGAAGCTTTGGACAAACTTACTCAAGTTTTTGGGATTAAAAATGAAATTAGAGCCCATCAACTTGAAAATGAGTTGCTTACATTGGATCCTAATAATTTTTCTTGCATTGAAGATTTCTTGTCCAAATTCAAGACCCTTAGATATCTCTTGGAAGGTGTTAAGGTTAAGAAAGAAGATAGTAACCTTATTTATTCCATCCTTACTAAGTTGGGTCCAGCCTACTCTGTATTTGTTTCCACCTTCCATTCTACAAGGGAAGCTTTCATTTGTCAAGGAAAAGACTCATACAAGCCCCCTTCCTTTGACTCTTTTTGTGATTCTTTAATAAGAGAACAAGAAAAACTCTTACACCTTGGTCTTCTTAATCTTGGAAACTCTTCCAAGAAAGCGTTAGCCGCCCAGCAGCAACCAAATTCAAAGAATCCTAAGAAGTCATATCCTAAAAAGAATGGTCCTAAACCAAACAAGGGTCCTAAGCAAACTCAGCCTCAAAATGAAAGATCATTCCAGCAAAATGATAAGACCAATAAAAACAAATGGAAGAAGACTGATAGACATTGTAACTTTTGTAATCGAGATGGCCACTTAGAATCAAAATGCTTTAAAAAGATGGAAGCCTTGGAAGCAGCAATGAAGAAGCATAACATCCGTGTGGAGCATTCTTCAACTTCAACTTCAACTTCATCTTCTGGAATGGCACTTTCTGCATGTCGTTGTCAATCATCTCAGTCTGGTTATGCATTAAATGTATCTTCTTCTTCTCATTCTCATGAGTGGCTCATTGATTCTGGAGCTTCTTATCACATGGCCAAAAACAAAGCCATGTTTTCTTCTTTAAATGATTGTAACACCAAAAATATATATGTTGGTGATGATAGATCTCTTAATGTTGTAGGGACTGGAACTGTTCATCTAGACAATGGTCAGTTTAATGATGTATTATGTGTTCCAACCTTATCCTGCAACCTTCTATCTGTATATCAGATAACTCATTCAGGTGAAGGTAAAATTGTTGAATTTTCACCTCATGATGTTGTAATCAAGGATCTAAAAGATCCTAAACAGGTTCTAGCTACTGGTATTGCTGATGATTCCACAAGGTTGTATAAGTTTCACAACTTTGGGTCATCAAATCTTCCCTCAGTATTTGTTGCTCATAATGATGAAGTGAGCAAACTTTGGCATGAGCGATTTGGTCACTTAAACTATCGCTCCCTTCAGCATCTATGTAAAGAAAATATGGTGACAGGTCTTCCTATGGTATCTTGCAGAGATGGTGTTTGTTCCGGATGTGTACTCGGAAAACATCATCGGGACAGTTTTGAAAAACGTGCCTCTTGGCACGCCTCAGCCCCTTTACAGCTTGTGCATAGTGATTTATGTGGTCCACTTCCAGTTGTTTCATTCTCTGGCTGCAAGTATTTCTTAACTTTCATTGATGATTTCTCCAGACGCACTTGGGTATACTTCTTAAAACTCAAGAGTGAAGTATTTAACATATTTTTGGCCTTCAAGGCCTTTGTTGAAAAACAATCTGGACATCAAATTCTTAAGCTAAGATCTGATAATGGCGGAGAATATGTTAAAAACACATTCATCAACTTTTGCACTGAGAATGGAATTCAAATGCAACATACTGTTCCATACACTCCACAACAAAATGGTGTAGCTGAAAGGAAAAATCGCACCTTAAAGGAAATGGCTAATTGTATGCTGCAATCTAAAGGACTCAGTCTTAGTTTTTGGGCTGAAGCAATTAATTGTGCAAATTATATAATAAATCGCACTCCTACTAAGGTTCTAAAGAATATCACTCCAGAAGAAGCATGGAGTTCAATCAAACCAGATGTAAGTCACTTTCGTGTTTTTGGAAGTGAAGCATGGGCCCATATTCCAGATGAAAAGCATAAAGCTTTAGAACCTAAGAGTGAGAAATGTACTTTTGTTGGATATTCTGAAGATGTAAAAGGTTATAGACTTATTCCATTTAAGTCCAAAAATGTTATCATTAGAAGAGATGTAAAATTTGATGAAAATAAATCGGCCTGCGAGCCTAGTCCGGCGGATGTGCCACCTCTTCCTATCTCTTCTACTTTTGAAAACATTTCTTCTTCAGATGATGAAAGTGAGGATGACAATCCTCCCCCACCTTCTCAGGATCCTCCTTCAGCTCCTCAACTTCCAAGATGGGTCCGTGCCACTCGAGATGCAGCAGGTGATCTTGCCGGTGATCCTACAGATCAGCGCCGTACACGTTCTCAGTTTGAACGAGCCTCTTCTTTACTGGCTCAAGCTCCAGTAAATCATGATCCTGACACTTTTGCAGAAGCTTCAGGCCATCCAGATTGGGAAGCAGCTATGCATGAAGAATATCATTCATTGTTGGCAAATGATACATGGGATCTTGTTCCTCTACCAAAGGGACGAAAACTTGTAAGATGTAAATGGGTTTACAGAACCAAGTATGGGCCAGATGGCAAAGTTGATAAACATAAAGCTCGTCTTGTTGCTAAGGGCTTTTCACAGGTTGAAGGCATTGACTACACTGAAACCTTCTCCCCAGTTGCCAAAATGAACTCTATCCGCCTTGTTCTTTCCCTTGCTGCCTCTTTTAAATGGGAAGTCCATCAGATGGATGTTAAATCTGCCTTCTTGCATGGGGACTTGCATGAAGAAATCTATATGGAACAACCCATTGGCTTCATCCAAACAGACTCCAGCCTTGTATGTCGACTTAAGAAATCTCTTTATGGTCTCAAGCAAGCTCCTCGGGCTTGGTATGCCAAAATGGATAGCTTTCTTTTAGAATCTGGCTTTTCTAGGTGTCATTCTGACAATACTGTCTACACCAAGAAAGTGGGCAACTCTCTTATCATCCTTGTTCTTTATGTTGATGATCTTATCCTTACTGGTAGTGATCCCAACCTTATAAACCATGTGAAGTCCATCCTTAAAAAGAAATTTCAAATGACAGACTTAGGACACTTACACTATTTTCTCGGTCTTCAAGTCTTGCAATCCAAGGAGGGTATTTCCATTTCCCAGTCCAAGTATGCTTGTGATATTCTTCGTCATTTTCACATGGAAGACTGTAAGCCAGCTCCTTCTCCCTTTCAGTCTGGAGTCAAACTTTCAGTCTCTTGTACTTCTCCTGAAGTTGATGCTACCTTATACCGTCAACTTGTAGGAAAACTTTTGTATCTAACCCATACTCGTCCTGACCTTTCCTTTGTTGTTGGCCTTGTTGCTCGGTTTATGCAAAACCCCCGTGAAAGTCATTGGAAAGCAGCTAAAAGAATACTTCGTTATGTTCGAGGTACAGTTCAGTTTGGGATTCATTACAGTGCCGAAGCAGCTCCTCTATTGGTTGGTTTCACTGATTCTGATTGGGCTGGTGACCCTGATGATCGGAAGTCTACTGCCGGTTATGTCTTCACTCTTGGTTCAGGACCTATTACATGGGCTTGTAAGAAACAGGCTGCCATTTCTCTTTCGTCAGCAGAAGCAGAGTATCGTGGTGCCGTGGAAGCTAGTAAGGAAGCCTTGTGGCTTCGTCAGATCCTATCAGAGTTTGGCTTTGAGCAGCAGCATCCGACTACACTTTGGTGTGATAATCAAAGTGCCATTCAGCTATGCAAAGATCCAGTCCAGCATCAGCGCAGCAAACACATTGAACTACACATGCACTTCATCAGAAAGCTCATTTATGACCATGTTCTTGAAGTGCAATATTGTTCAACAGATGATCAGGTTGCAGACATCTTCACAAAGGCTCTCACAGAGGCGAAGTTCACTAAACTTCGATATATGCTTGGAGTTCAGGAAGTTGTCACTAAGGGGGGATAG___GCTCTAGTGCCTCCTTCCTTCTCCTATTGTGTCATATTTGTAAATCCTTCAATCCTATCCCAAGTTGTTCTTAAGGGGGGATGTTAGGATATTCCGACACATAGGAATAGTTAAGTTCAACTTGGTCTAGTATAGAGTTAGGTATAGAGTTAGGTAAAGTGTGTTTCTTTACCGTTGTACATTACCGTTGTACACTTTGTAACTTACAATCCGACGGTCACGATATGTAGTGATCCGACGGTTCACTCTCACCTCGGTATTACCGACACTTGATCCGTGGCTTGACACCCGATTGGTCCATGAGTTCTATTTAAAGCGCATGGAGGGTCAGTGTTCGGGTAATCCGTGCATGAGAGAAAGCTTATGTAAATTTTCATTCTTTGATTAATAAATTGCCTGTAGTGCCCACGTTGGGACAGGCCGTGGACTGTTTCCCTCTTTGAGGGTTTTAACCACGTCAAAAATACTGGTGTATTGATTTGTGATCTGGTTGTGAGCGGTGTCCTTTTGGTATTCTTTCTGAGGAACTTACCCTGTAAATTCCTACATGGTATCAGAGCTATTTGAGGGCCGCGTCCGTTGGTGATCCAAATCTGAAGCCGGTAGAACTGCATGCGGCTGTCGTTTCCTAGATCTGCTGTTTCTGACTGCTTTCGGGCCGAGAGGACTGCTCTGTTGCGTTCGGAGCATCTGTTCCAGTGAGGAACCCCTTTCGTTTCGTGCGAAAAGGTTTCCGGTAGCCCTATCTGCGTCATTTTTCAGATCGGGAGGTATACTAGTTTTTTTTTGCAGTTTACTGTTATTTTCTCTCTGTTTATTTCGGTTTTGGTTTATTTAGCCCTTTTTTTTTTTtACCGGATCTATACCTTTCATTTCTGCGTATGCTCTTTGCCCTGCGACTCTGTGCGATCTGGGCAAATCAGAAACAGAAAGGAAGGATTTTTCTCATGCGTATGCTCTTTTCCCTGCACCTTAGTGTGATCTCGGAAAATCAGAAACATTGAGAAAAATATTTTAGTTTTTCGGCTAAAGCTAACTTTGAGATTTTTTTTAAAAATTTCTAGTTTTTTGGCTAAAGCTAACTTCGAGCCGCAAGGTTCGGTT

Fln Alignment:

Contig5974___LCVPTLSCNLLSVYQITHSGEGKIVEFSPHDVVIKDLKDPKQVLATGIADDSTRLYKFHNFGSSNLPSVFVAHNDEVSKLWHERFGHLNYRSLQHLCKENMVTGLPMVSCRDGVCSGCVLGKHHRDSFEKRASWHASAPLQLVHSDLCGPLPVVSFSGCKYFLTFIDDFSRRTWVYFLKLKSEVFNIFLAFKAFVEKQSGHQILKLRSDNGGEYVKNTFINFCTENGIQMQHTVPYTPQQNGVAERKNRTLKEMANCMLQSKGLSLSFWAEAINCANYIINRTPTKVLKNITPEEAWSSIKPDVSHFRVFGSEAWAHIPDEKHKALEPKSEKCTFVGYSEDVKGYRLIPFKSKNVIIRRDVKFDENKSACEPSPADVPPLPISS
B8LKX7______________MLVPNLKSNLLSVNQIAN--QGYKVEFYKDKCLIKDINSNYKVVASGYVENG--LYKFGRFTSNE--KALVAEVDNVSRLWHERMGHLNYKSLSLMKRFEMVYGLPKISQSQGVCEGCMSGKQHMEKFIKGKSWRAKTPLHLVHSDLMGPLEHPSISGSRYVLTFIDDYSRRIWVYFLKNKDEVFEKFKEFKAFVEKQSGKSIKILRTDNGKEYVNKEFDHYCKYNGIKREHTVPYTPQQNGVAERKNRTLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKVFGCDVYVHIPDEKRKKLDRKSHKCIMVGYSETSKAYRVYDPEKNEILIRRDVIFDER---CIPSTKSSSLSPTSS

SNPs (tot: 274)

Position	A %	C %	G %	T %	Probability
120	33		66		1.0
122		33	66		0.997452
190	16		83		0.994512
210		83		16	0.994512
226		83		16	0.994512
228		83		16	0.994512
253	25			75	0.996473
443	33	66			0.997452
445		33		66	1.0
447			66	33	0.997452
458	33		66		0.997452
460		66		33	0.997452
466		66		33	0.997452
487	20		80		0.995493
547		75		25	0.996473
562	20		80		0.995493
572	16		83		0.994512
578	16		83		0.994512
617		85		14	0.993533
680	25	75			0.996473
683		80		20	0.995493
684			85	14	0.993533
731			71	28	1.0
732	71		28		1.0
734	71		28		1.0
735	71			28	1.0
736			28	71	1.0
737	28			71	1.0
738		28		71	1.0
740		71	28		1.0
741	71	28			1.0
742		28		71	1.0
746		28	28	14	1.0
751	28			71	1.0
753			28	71	1.0
756		28		71	1.0
760		80		20	0.995493
761	20		80		0.995493
924	77		22		0.999999
962		25		75	1.0
970		12		87	0.992554
1005		16		83	0.994512
1006	16		83		0.994512
1008			83	16	0.994512
1044		25		75	0.996473
1076	75	25			0.996473
1078	75	25			0.996473
1123	33	66			0.997452
1130		66		33	0.997452
1146	66			33	0.997452
1150	42		57		1.0
1167	42		57		1.0
1185	14		85		0.993533
1186		14		85	0.993533
1187	14		85		0.993533
1188	85			14	0.993533
1189	85			14	0.993533
1245	46			53	1.0
1246	46		53		1.0
1258	7	15		76	0.999983
1270		15		84	0.999986
1271	30	7	61		1.0
1295	18	81			0.999994
1336			88	11	0.923564
1356			87	12	0.992554
1359	12		87		0.992554
1363	14		85		0.993533
1364		57		42	1.0
1369	14		85		0.993533
1397	50			50	1.0
1409		20	80		0.995493
1421	50			50	1.0
1470	25		75		0.996473
1476	33			66	0.997452
1477	33		66		0.997452
1604			33	66	0.997452
1610	66		33		0.997452
1766			33	66	1.0
1829		33		66	1.0
1850	83		16		0.994512
1852		50		50	1.0
1862	33		66		1.0
1877	83		16		0.994512
1881		40		60	1.0
1885	20		60	20	0.99255
1886	80	20			0.995493
1901		50		50	1.0
1905			75	25	0.996473
1915			25	75	0.996473
1933	62			37	1.0
1985		25		75	1.0
1987		25	75		1.0
1995		28		71	1.0
2004	71	28			1.0
2032			80	20	0.995493
2045	80		20		0.995493
2048	50		50		1.0
2059		75		25	0.996473
2060	75		25		0.996473
2062		75	25		0.996473
2063	75			25	0.996473
2064			25	75	0.996473
2066	75	25			0.996473
2069	75	25			0.996473
2070	50	50			1.0
2071	50	50			1.0
2073	50		50		1.0
2075			50	50	1.0
2076	50	25	25		0.995533
2079	50			50	1.0
2185	16		83		0.994512
2191			83	16	0.994512
2204	83		16		0.994512
2220		83		16	0.994512
2232		83		16	0.994512
2241			50	33	1.0
2252	50		50		1.0
2321		80		20	0.995493
2339	40		60		1.0
2342	40		60		1.0
2349	40		40	20	1.0
2367		60		40	1.0
2386	25	75			0.996473
2505		75		25	0.996473
2560		90		10	0.90298
2565			80	20	0.999996
2570		80		20	0.999996
2580	10			90	0.90298
2584	11	88			0.923564
2590			88	11	0.923564
2598			88	11	0.923564
2599		88		11	0.923564
2603		88		11	0.923564
2614	11		88		0.923564
2617		88		11	0.923564
2619	11		88		0.923564
2626	11	88			0.923564
2628	22		77		0.999999
2633	77		22		0.999999
2892	33		66		0.997452
2899			66	33	0.997452
2972	66	33			0.997452
3053		33		66	0.997452
3092		75		25	0.996473
3115	75		25		0.996473
3118			75	25	0.996473
3127	80			20	0.995493
3138	20		80		0.995493
3144			20	80	0.995493
3166	80	20			0.995493
3169	20	20	60		0.99255
3187	40			60	1.0
3223	33		66		0.997452
3228		80		20	0.995493
3229		20		80	0.995493
3232	80		20		0.995493
3238		80		20	0.995493
3295	33			66	0.997452
3296		33		66	0.997452
3297	33		66		0.997452
3365		16		83	0.994512
3376		16		83	0.994512
3377	16			83	0.994512
3382	50		50		1.0
3383		83		16	0.994512
3388	80		20		0.995493
3393	40			60	1.0
3399	40		60		1.0
3424	25			75	0.996473
3438		75		25	0.996473
3439		75		25	0.996473
3448		75	25		0.996473
3455	25		75		0.996473
3463		25		75	0.996473
3468		75		25	0.996473
3469	75		25		0.996473
3498	25			75	0.996473
3500		75		25	0.996473
3502	25	25		50	0.995533
3504	25			75	0.996473
3506		25	75		0.996473
3507	75	25			0.996473
3508	25		75		0.996473
3510	75		25		0.996473
3511	75		25		0.996473
3517	75		25		0.996473
3519		25		75	0.996473
3987			75	25	0.996473
3991	25		75		0.996473
4003	25			75	0.996473
4016	75		25		0.996473
4020		75		25	0.996473
4021	75	25			0.996473
4027		50		50	1.0
4041			66	33	0.997452
4047		33		66	0.997452
4053		66		33	0.997452
4055	33		66		0.997452
4056	33			66	0.997452
4067		33		66	1.0
4095		33		66	0.997452
4096	66		33		0.997452
4099		33		66	0.997452
4109		66		33	0.997452
4111	66		33		0.997452
4117		33		66	0.997452
4145			66	33	0.997452
4159	33		66		1.0
4164	25	75			0.996473
4210			25	75	0.996473
4212	75		25		0.996473
4241		66		33	0.997452
4264	33			66	0.997452
4279	66	33			0.997452
4280	33		66		0.997452
4544		20	80		0.995493
4545		20	80		0.995493
4546	20		20	60	0.99255
4547	20	20		60	0.99255
4549		75		25	0.996473
4571		25		75	0.996473
4599		83		16	0.994512
4617		83		16	0.994512
4638		83	16		0.994512
4670	40		60		1.0
4671	60			40	1.0
4674	20	80			0.995493
4677			40	60	1.0
4680		75	25		0.996473
4685	25	75			0.996473
4741	50			50	1.0
4781		25		75	0.996473
4786	25	75			0.996473
4789	50		50		1.0
4792	25	75			0.996473
4832		25	75		0.996473
4860			20	80	0.995493
4879	14	71		14	0.984337
4912	83	16			0.994512
4913		16		83	0.994512
4914		16		83	0.994512
4915	16			83	0.994512
4974		88		11	0.923564
4990	87		12		0.992554
4994	10		90		0.90298
5000	90			10	0.90298
5029	90	10			0.90298
5030		10		90	0.90298
5032	10			90	0.90298
5051	10		90		0.90298
5054	30		70		1.0
5056		90		10	0.90298
5059		10	90		0.90298
5060		10		90	0.90298
5062	10			90	0.90298
5067	12	87			0.992554
5095	75			24	1.0
5101	10		89		1.0
5102	75			24	1.0
5128		81		18	1.0
5131	7	92			0.999664
5142		75		25	1.0
5148	8		91		0.999766
5149	79		20		1.0
5153	79			20	1.0
5162		91		8	0.999766
5163		75		25	1.0
5186	9	90			0.999842
5194		11		88	0.923564
5207		25	75		0.996473
5211		75		25	0.996473
5220	25	50		25	0.995533
5229	75		25		0.996473
5232	25		75		0.996473

SSRs (tot: 2)

Start position	End position	Sequence	Length
4189	4200	AGA AGA AGA AGA	12
4267	4289	TGAAGT TGAAGT TGAAGT TGAAG	23

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain