SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene5604

Length: 862 nt

Origin of reads: Inia v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene5604

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	nodulin-like protein [Arabidopsis thaliana] emb\|CAB79966.1\| nodulin-like protein [Arabidopsis thaliana]	-	-	2.0e-30	47%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	43%
Blast2go	early nodulin 55-2	-	-	2.11568e-37	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	anchored to membrane	GO:0031225	Cellular Component	2.11568e-37	59%

Source	InterPros	Term	Type	e value	Identity
Sma3	Plastocyanin-like	IPR003245	-	0.0	-
Sma3	Cupredoxin	IPR008972	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 6)

Position	A %	C %	G %	T %	Probability
410		22		77	0.999999
427	88			11	0.923564
657		16		83	0.994512
841		66		33	0.997452
842	33			66	0.997452
843		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain