SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene5407

Length: 721 nt

Origin of reads: Biogeco1 v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene5407 (antisense)

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucose glucosyltransferase [Fragaria x ananassa]	-	-	2.0e-21	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	72%
Blast2go	udp-glycosyltransferase 73b3-like	-	-	0.0	51%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	0.0	51%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	51%
Blast2go	N-Glycan biosynthesis	00510	51%
Blast2go	Mucin type O-Glycan biosynthesis	00512	51%
Blast2go	Various types of N-glycan biosynthesis	00513	51%
Blast2go	Other types of O-glycan biosynthesis	00514	51%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	51%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	51%
Blast2go	Lipopolysaccharide biosynthesis	00540	51%
Blast2go	Peptidoglycan biosynthesis	00550	51%
Blast2go	Glycerolipid metabolism	00561	51%
Blast2go	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	51%
Blast2go	Sphingolipid metabolism	00600	51%
Blast2go	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	51%
Blast2go	Glycosphingolipid biosynthesis - globo series	00603	51%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	51%
Blast2go	Carotenoid biosynthesis	00906	51%
Blast2go	Zeatin biosynthesis	00908	51%
Blast2go	Flavonoid biosynthesis	00941	51%
Blast2go	Anthocyanin biosynthesis	00942	51%
Blast2go	Flavone and flavonol biosynthesis	00944	51%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	51%
Blast2go	Betalain biosynthesis	00965	51%
Blast2go	Biosynthesis of type II polyketide products	01057	51%
Blast2go	Metabolic pathways	01100	51%
Blast2go	Biosynthesis of secondary metabolites	01110	51%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	51%
Blast2go	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	51%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 17)

Position	A %	C %	G %	T %	Probability
558	20			80	0.995493
572	28		71		1.0
582			28	71	1.0
602			28	71	1.0
672			40	60	1.0
676	75	25			0.996473
677		25	75		0.996473
678			75	25	0.996473
686		25	75		0.996473
687		25	75		0.996473
688	75			25	0.996473
691	25	75			0.996473
695	25		75		0.996473
699			75	25	0.996473
700	25			75	0.996473
703	25			75	0.996473
704			25	75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain