SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene5013

Length: 922 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene5013

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Drf_FH1 multi-domain protein	-	-	1.0e-17	42%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	95%

Full-Lengther Next Prediction

SNPs (tot: 22)

Position	A %	C %	G %	T %	Probability
487		66		33	0.997452
488		66	33		0.997452
490		66	33		0.997452
537	66		33		0.997452
561		16		83	0.994512
562			16	83	0.994512
564		16		83	0.994512
567		83	16		0.994512
569	85	14			0.993533
570	85	14			0.993533
573	85		14		0.993533
575	85		14		0.993533
576	85			14	0.993533
580	85	14			0.993533
650	14		85		0.993533
651		14		85	0.993533
654			85	14	0.993533
676	84		15		0.999986
761	11		88		0.923564
766		87		12	0.992554
809	25			75	0.996473
862			66	33	0.997452

SSRs (tot: 1)

Start position	End position	Sequence	Length
340	351	CTC CTC CTC CTC	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain