SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene4813

Length: 947 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene4813

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Oxidoreductase, putative n=1 Tax=Ricinus communis RepID=B9SA55_RICCO	-	-	3.0e-28	61%
FL-Next	tr=Oxidoreductase, putative; Ricinus communis (Castor bean).	-	-	0.0	61%
Blast2go	2og-fe oxygenase	-	-	6.82118e-34	80%

Source	GOs	Term	Type	e value	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	6.82118e-34	80%
Blast2go	oxidoreductase activity	GO:0016491	Molecular Function	6.82118e-34	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	Oxoglutarate/iron-dependent oxygenase	IPR005123	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
401	25	75			0.996473
405		25		75	0.996473
406		75	25		0.996473
407	75			25	0.996473
409	25			75	0.996473
411	75	25			0.996473
412	75			25	0.996473
413	75			25	0.996473
414		75	25		0.996473
415	75		25		0.996473
420		25		75	0.996473
422	75			25	0.996473
424	25		75		0.996473
574	50		50		1.0
658			71	14	0.984337
659			85	14	0.993533
661			57	42	1.0
851	50		50		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain