SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene4532

Length: 1937 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene4532

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Cytochrome P450 750A1 n=1 Tax=Pinus taeda RepID=C75A1_PINTA	-	-	63%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	77%
Blast2go	cytochrome p450 monooxygenase cyp736b	-	-	69%

Source	GOs	Term	Type	Identity
Blast2go	oxidation-reduction process	GO:0055114	Biological Process	69%
Blast2go	electron carrier activity	GO:0009055	Molecular Function	69%
Blast2go	monooxygenase activity	GO:0004497	Molecular Function	69%
Blast2go	heme binding	GO:0020037	Molecular Function	69%
Blast2go	integral to membrane	GO:0016021	Cellular Component	69%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PS63

Fln msg:

Fln protein: MAFHSLRSLPFPATFTVADGGPPAATVLCLLWAFFMIWFLRKRRTSATLPPGPYAWPIIGNLHQLILPAHRSLRALADKYGPILFLHLGSVPTVVVSSSETAKEFLKTHDLIFASRPPTAAGRLMFSNSKDVVFAPYGDHWRQMRKICVLELLTAKRIESFKSVREEEVSAMISSIWEESEKGKMGVNVSKAVSTLTSNIVWRILAGRKFSDDDLGGNFKGFKGLMTELTATVGEFNIGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVNHLQKEAVDAEPHVQDFVDVLLHMAKDDTKITRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLKEEIESVVGQHCKVKESDLANLKYLHCVVKETLRLYPAAPLAIPHESAETVTVGGYFIPKKTMLMVNVWAIGRDPKVWGADAAEFKPERFMEDEHVNVTDPSNFNMIPFGAGRRGCPGASMAIPTVQLALAQLLHTFDWRVDGDPSQLDMKEACGLTIPRKVALCAFPKLNSSFPT*

Protein Length: 528

Fln nts: TTCAGTGCTTAGTGATTAGGAAGGGTGTGCGTT_-_ATGGCTTTCCATAGTTTGCGTTCTCTACCTTTCCCTGCAACATTCACAGTCGCTGATGGAGGGCCTCCCGCAGCAACTGTTCTGTGCCTACTCTGGGCTTTCTTCATGATATGGTTTTTGCGCAAGAGAAGAACTAGTGCCACGCTGCCACCAGGACCCTATGCATGGCCCATCATAGGAAATCTCCACCAATTAATACTGCCCGCTCACCGTTCTCTTAGAGCCCTTGCTGACAAATATGGTCCCATTCTGTTTCTGCACTTAGGCTCTGTCCCTACCGTCGTCGTTTCTTCTTCTGAGACGGCCAAAGAGTTTCTCAAAACTCATGACTTGATTTTTGCCAGTCGACCCCCAACAGCCGCTGGGAGATTGATGTTTTCCAACTCCAAAGATGTGGTGTTCGCTCCATATGGAGATCACTGGAGGCAAATGAGAAAAATATGCGTGTTAGAACTACTGACTGCCAAAAGAATCGAGTCCTTCAAGAGTGTGCGAGAGGAAGAGGTGTCTGCAATGATCTCTTCAATTTGGGAGGAGAGTGAGAAGGGAAAAATGGGCGTGAATGTGAGCAAGGCTGTCTCCACTCTCACCTCCAATATTGTTTGGCGAATACTGGCGGGGAGGAAATTTTCTGACGATGATTTGGGTGGCAATTTCAAAGGGTTTAAAGGCCTGATGACAGAGTTGACAGCTACAGTGGGAGAGTTCAACATTGGGGACTTCATTCCGTATTTGGATTGGCTCGATTTGCAAGGTATCAAGCGCCGCATGAAGAAAATTCATAAAACATTCGATGAATTTGCGGAGAAAATAATAGACGACCATGTTAATGTGAATCATCTCCAGAAAGAGGCCGTAGACGCAGAGCCTCATGTTCAAGACTTCGTGGATGTGCTGCTACACATGGCTAAGGACGACACCAAAATTACACGGGAAACCATCAAGGCTGTTGTGCTTGACTTGTTCGGCGCTGGCTTGGATAGAATATCAATTTCGTTAGAATGGGCAATGAGCGAGCTGCTCAGACATCCCCGTGCAATGAAGAAATTAAAAGAGGAAATCGAATCGGTCGTTGGCCAACATTGCAAAGTAAAGGAGTCCGATCTAGCAAACCTGAAATACCTCCACTGTGTGGTGAAAGAGACTCTGCGACTATACCCAGCGGCGCCCTTAGCGATTCCTCATGAATCTGCAGAGACTGTGACAGTAGGAGGATACTTTATCCCTAAGAAAACAATGTTGATGGTGAATGTCTGGGCTATAGGAAGGGATCCTAAGGTGTGGGGTGCAGATGCTGCTGAATTCAAGCCGGAGAGATTCATGGAAGACGAACATGTCAATGTCACAGATCCATCAAATTTCAATATGATACCGTTCGGCGCAGGAAGGAGAGGATGCCCAGGGGCATCGATGGCTATTCCTACGGTTCAGCTTGCATTGGCTCAGTTGTTACACACTTTTGATTGGAGAGTGGACGGTGATCCGTCCCAGTTGGATATGAAGGAAGCATGTGGATTAACCATTCCACGGAAAGTTGCGCTCTGTGCTTTTCCAAAGTTGAACAGCAGCTTTCCAACGTAA___TACCTGGGAGGATACAAGCGACGATGCCTTTTCTTCGTTTTTCTCCGTTGGTGATGGTTTTTCTGTTTCAATAATACAGAAATCTCTAGAATATTCTCCTAATCAGTTATGTGCAGTTAAAACTGCTATATGTTGTTAAAATCGTTTGTCTTAATTAGACTTCGTTGGTTGTCAGTTCTTGTATTCTAAGAATCAGCTCAATCATAATATACTCTTATAGATGTAACCGTTTCGTCTTATAAGTGAATACAAGTGTAGTTGTGTACTCTTAAGAGAAAGTCACTTTCTCATAAGGGATCTGCATCCTTTGTTCAATTCCAAAA

Fln Alignment:

Contig4532___MAFHSLR-SLPFPATFTVADGGPPAATVLCLLWAFFMIWFLRKRRTSATLPPGPYAWPIIGNLHQLILPAHRSLRALADKYGPILFLHLGXXXXXXXXXXETAKEFLKTHDLIFASRPPTAAGRLMFSNSKDVVFAPYGDHWRQMRKICVLELLTAKRIESFKSVREEEVSAMISSIWEESEKGKMGVNVSKAVSTLTSNIVWRILAGRKFSDDDLGGNFKGFKGLMTELTATVGEFNIGDFIPYLDWLDLQGIKRRMKKIHKTFDEFAEKIIDDHVNVNHLQKEA------VDAEPHVQDFVDVLLHMAKDDTKITRETIKAVVLDLFGAGLDRISISLEWAMSELLRHPRAMKKLKEEIESVVGQHCKVKESDLANLKYLHCVVKETLRLYPAAPLAIPHESAETVTVGGYFIPKKTMLMVNVWAIGRDPKVWGADAAEFKPERFMEDEHVNVTDPSNFNMIPFGAGRRGCPGASMAIPTVQLALAQLLHTFDWRVDGDPSQLDMKEACGLTIPRKVALCAFPKLNSSFP
C0PS63______________MAFHNLSVCLPLPATSSTA-------AILCIFFSFFFIWFSHNRRIRARLPPGPYALPIIGNLHQLVLPAHRTFKSLADKYGPIFFLRLGSVPTVVVSSSEIAKQFLKNHDLIFASRPPRAAGRLMFFNSKDVAFAPYGDHWRQMRKICVLELLTAKRIESFKHVREEEVSAMIRSVWEESGNGRTGVNVSKAISTLTSNIVWRILANRKFSDDDLGGDFKGFKDLLVELTARVGDFNIGDFIPYLDWLDLQGISRCMKKIHKTFDEFAEKIIDDHVNVNHLMAAASNGQKRADAEPHVQDFVDVLLHMAVTNTKITRKTIKALVLDMFAGGLETTSTTLEWAMSELLRHPNVMKRLQEEIDSIVGHHGKVKESDLATMKYLHCVVKETLRLYPAVPLAIPHESVEAVTVGGYYIPKKATVMVNVWAIGRDPNVWGAYASDFKPERFMENEHINLTDQSDFSMIPFGSGRRGCPGASMAIPTIELALAQLLHTFDWRVEGDPSRLDMKEACGLTIPRQVPLCAYPSLRVSFP

SNPs (tot: 9)

Position	A %	C %	G %	T %	Probability
1797		11	88		0.999937
1833	87		12		0.999964
1834			12	87	0.999964
1843	6	80		13	0.999961
1882	10	90			0.90298
1883	10			90	0.90298
1885	10	90			0.90298
1886			11	88	0.923564
1929		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain