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UniGene Name: sp_v2.0_unigene4405
Length: 245 nt
Origin of reads:
 UniGene Fasta
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| >sp_v2.0_unigene4405
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Ace file of the UniGene sp_v2.0_unigene4405
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If you push the Download ace button, you will download an ace file of this UniGene.
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| Annotations |
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| Source | Descriptions | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| AutoFact | PREDICTED: catenin (cadherin-associated protein), beta 1, 88kDa isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E1FC25 | - | - | 4.0e-29 | 100% |
| Blast2go | catenin beta-1 | - | - | 4.68707e-39 | 99% |
| Source | GOs | Term | Type | e value | Identity |
|---|---|---|---|---|---|
| Blast2go | response to cytokine stimulus | GO:0034097 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of apoptotic process | GO:0043065 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of centriole-centriole cohesion | GO:0030997 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of heparan sulfate proteoglycan biosynthetic process | GO:0010909 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | androgen receptor signaling pathway | GO:0030521 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cellular response to indole-3-methanol | GO:0071681 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic axis specification | GO:0000578 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | synaptic vesicle transport | GO:0048489 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic arm morphogenesis | GO:0035117 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cytoskeletal anchoring at plasma membrane | GO:0007016 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | endodermal cell fate commitment | GO:0001711 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of epithelial cell proliferation involved in prostate gland development | GO:0060769 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | mesenchymal to epithelial transition involved in metanephros morphogenesis | GO:0003337 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of fibroblast proliferation | GO:0048145 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | glial cell fate determination | GO:0007403 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of I-kappaB kinase/NF-kappaB cascade | GO:0043123 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of angiogenesis | GO:0045765 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cellular response to growth factor stimulus | GO:0071363 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | proximal/distal pattern formation | GO:0009954 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | gastrulation with mouth forming second | GO:0001702 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | in utero embryonic development | GO:0001701 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of mesenchymal cell proliferation | GO:0002053 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic heart tube development | GO:0035050 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic leg joint morphogenesis | GO:0046591 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cellular response to organic cyclic compound | GO:0071407 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of myelination | GO:0031641 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of MAPK cascade | GO:0043410 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cell-cell adhesion | GO:0016337 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | smooth muscle cell differentiation | GO:0051145 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of oligodendrocyte differentiation | GO:0048715 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | oocyte development | GO:0048599 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | synapse organization | GO:0050808 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | anterior/posterior axis specification | GO:0009948 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | Schwann cell proliferation | GO:0014010 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | response to cadmium ion | GO:0046686 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | dorsal/ventral axis specification | GO:0009950 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | hindbrain development | GO:0030902 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of smooth muscle cell proliferation | GO:0048660 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of heart induction by canonical Wnt receptor signaling pathway | GO:0003136 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | odontogenesis of dentin-containing tooth | GO:0042475 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | oviduct development | GO:0060066 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of transcription from RNA polymerase II promoter | GO:0045944 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of muscle cell differentiation | GO:0051149 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | forebrain development | GO:0030900 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of cell proliferation | GO:0008285 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of fibroblast growth factor receptor signaling pathway | GO:0045743 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | thymus development | GO:0048538 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of endothelial cell differentiation | GO:0045603 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | patterning of blood vessels | GO:0001569 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | epithelial cell differentiation involved in prostate gland development | GO:0060742 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | midgut development | GO:0007494 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | genitalia morphogenesis | GO:0035112 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | pancreas development | GO:0031016 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | lens morphogenesis in camera-type eye | GO:0002089 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | hair follicle placode formation | GO:0060789 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | T cell differentiation in thymus | GO:0033077 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | liver development | GO:0001889 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic digit morphogenesis | GO:0042733 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of nephron tubule epithelial cell differentiation | GO:0072182 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | protein heterooligomerization | GO:0051291 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of chondrocyte differentiation | GO:0032331 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | renal vesicle formation | GO:0072033 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | renal outer medulla development | GO:0072054 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of osteoclast differentiation | GO:0045671 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of anti-apoptosis | GO:0045768 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | bone resorption | GO:0045453 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of branching involved in lung morphogenesis | GO:0061047 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | renal inner medulla development | GO:0072053 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cellular component disassembly involved in apoptotic process | GO:0006921 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | ectoderm development | GO:0007398 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | branching involved in ureteric bud morphogenesis | GO:0001658 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | trachea formation | GO:0060440 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | negative regulation of transcription from RNA polymerase II promoter | GO:0000122 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic hindlimb morphogenesis | GO:0035116 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | response to estradiol stimulus | GO:0032355 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | skin development | GO:0043588 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of centromeric sister chromatid cohesion | GO:0070602 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | lung-associated mesenchyme development | GO:0060484 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | nephron tubule formation | GO:0072079 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | myoblast differentiation | GO:0045445 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cell maturation | GO:0048469 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | lung induction | GO:0060492 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | central nervous system vasculogenesis | GO:0022009 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | lung cell differentiation | GO:0060479 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | cell-matrix adhesion | GO:0007160 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of calcium ion import | GO:0090279 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | embryonic foregut morphogenesis | GO:0048617 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | hair follicle morphogenesis | GO:0031069 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of T cell proliferation | GO:0042129 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | response to drug | GO:0042493 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | male genitalia development | GO:0030539 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of osteoblast differentiation | GO:0045669 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | adherens junction assembly | GO:0034333 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | mesenchymal cell proliferation involved in lung development | GO:0060916 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | estrogen receptor binding | GO:0030331 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | protein kinase binding | GO:0019901 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | protein phosphatase binding | GO:0019903 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | RPTP-like protein binding | GO:0042153 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | specific RNA polymerase II transcription factor activity | GO:0003704 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | protein complex binding | GO:0032403 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | repressing transcription factor binding | GO:0070491 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | cadherin binding | GO:0045296 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | structural molecule activity | GO:0005198 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | ionotropic glutamate receptor binding | GO:0035255 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | transcription regulatory region DNA binding | GO:0044212 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | sequence-specific DNA binding transcription factor activity | GO:0003700 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | transcription activator activity | GO:0016563 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | signal transducer activity | GO:0004871 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | transcription repressor activity | GO:0016564 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | double-stranded DNA binding | GO:0003690 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | protein C-terminus binding | GO:0008022 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | promoter binding | GO:0010843 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | androgen receptor binding | GO:0050681 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | alpha-catenin binding | GO:0045294 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | I-SMAD binding | GO:0070411 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | transcription coactivator activity | GO:0003713 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | R-SMAD binding | GO:0070412 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | chromatin binding | GO:0003682 | Molecular Function | 4.68707e-39 | 99% |
| Blast2go | Scrib-APC-beta-catenin complex | GO:0034750 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | zonula adherens | GO:0005915 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | desmosome | GO:0030057 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | apical part of cell | GO:0045177 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | APC-Axin-1-beta-catenin complex | GO:0034742 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | catenin complex | GO:0016342 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | synapse | GO:0045202 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | dendritic shaft | GO:0043198 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | cell cortex | GO:0005938 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | Axin-APC-beta-catenin-GSK3B complex | GO:0034747 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | protein-DNA complex | GO:0032993 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | transcription factor complex | GO:0005667 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | beta-catenin-TCF7L2 complex | GO:0070369 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | Z disc | GO:0030018 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | lamellipodium | GO:0030027 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | microvillus membrane | GO:0031528 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | centrosome | GO:0005813 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | membrane fraction | GO:0005624 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | perinuclear region of cytoplasm | GO:0048471 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | lateral plasma membrane | GO:0016328 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | cell-substrate adherens junction | GO:0005924 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | fascia adherens | GO:0005916 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | internal side of plasma membrane | GO:0009898 | Cellular Component | 4.68707e-39 | 99% |
| Blast2go | endothelial tube morphogenesis | GO:0061154 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | regulation of protein localization at cell surface | GO:2000008 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | canonical Wnt receptor signaling pathway involved in positive regulation of epithelial to mesenchymal transition | GO:0044334 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | ion channel binding | GO:0044325 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | canonical Wnt receptor signaling pathway involved in negative regulation of apoptotic process | GO:0044336 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | fungiform papilla formation | GO:0061198 | Biological Process | 4.68707e-39 | 99% |
| Blast2go | positive regulation of determination of dorsal identity | GO:2000017 | Biological Process | 4.68707e-39 | 99% |
| Full-Lengther Next Prediction |
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Fln status: Putative coding
Fln database: testcode
Fln msg:
Test code: 0
Test Code was used to find complete genes when there was not found a reliable orthologue. The best ORF (Open Reading Frame) is shown, and only ORFs > 200pb were analyzed. Your ORF will be more reliable if a stop codon was found before the start codon. A Test Code value > 0.95 means the ORF is probably coding. A Test Code value < 0.74 means the ORF is probably non-coding. Test Code values in between 0.74 and 0.95 mean it is uncertain whether the ORF is coding or not.
| SNPs (tot: 3) |
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| Position | A % | C % | G % | T % | Probability |
|---|---|---|---|---|---|
| 111 | 87 | 12 | 0.992554 | ||
| 116 | 12 | 87 | 0.992554 | ||
| 154 | 12 | 87 | 0.992554 |
Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain
