SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene4304

Length: 1268 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene4304 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	putative acid phosphatase [Lupinus luteus]	-	-	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	80%
Blast2go	purple acid phosphatase	-	-	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	hydrolase activity	GO:0016787	Molecular Function	0.0	72%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	0.0	72%

Source	InterPros	Term	Type	e value	Identity
Sma3	Metallophosphoesterase domain	IPR004843	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LPI1

Fln msg:

Fln protein: MAMELQAALHYSWRCILMFSMAFLLLSSNCIMAADPLKFLVVGDWGRKGLYNQSQVAAQMGKIAQPLNIDFVISTGDNFYEDGLNGTDDPSFKQSFSAIYTASSLQKPWHLVLGNHDYRGDTLSQLDPALKRRDDRWNCYRQNLPFSCKGASCSSVDFFFIDTTPFVDIYWTYTKHKYDWRGVQPRQPYLNKQLKDLNNTLKVSKTTWKIVVGHHPIRSIGSHDDTAELKKQLLPILEANKVDLYVNGHSHCLEDIQSKTSSMHFLTSGGGSKAWGGVSSSANKDGLNFYYAGQGFMSVQITATFVKAVFYDIDGNSLHSVNLTKN*

Protein Length: 328

Fln nts: AAGAAGCTAATATACATAGCAAAGTCTACTGTTTCAGTAAGCAGCCTTCAAGGTTATCACAGTTCCCACCATTACACCTGTATCGAAATTGTTTCCTCCACTGAAA_-_ATGGCGATGGAGCTTCAAGCTGCCCTACACTACTCCTGGCGCTGCATTTTAATGTTCTCCATGGCGTTCCTACTACTTTCCAGCAACTGTATCATGGCTGCCGATCCTCTCAAATTCCTTGTGGTGGGCGACTGGGGCAGAAAAGGTTTATACAATCAGTCCCAAGTTGCTGCACAGATGGGGAAGATCGCCCAACCGTTGAACATCGATTTTGTCATTTCAACTGGAGATAATTTTTATGAAGATGGGTTGAATGGAACAGATGATCCAAGCTTTAAGCAGTCATTCTCTGCCATTTATACCGCCAGTAGCCTTCAGAAGCCATGGCATTTGGTACTTGGGAACCACGACTACAGGGGAGATACACTGTCACAGTTGGATCCTGCTCTGAAACGCCGGGATGATCGATGGAATTGTTACAGACAGAACTTGCCATTTTCATGTAAAGGAGCGAGCTGTTCATCTGTGGATTTTTTCTTCATTGACACAACCCCATTTGTGGATATATATTGGACCTACACCAAACATAAGTATGATTGGAGAGGAGTTCAACCTCGTCAACCCTACCTCAACAAACAGTTGAAGGACCTCAACAATACCTTGAAAGTTTCAAAGACAACCTGGAAAATAGTAGTGGGTCATCATCCCATACGAAGCATCGGATCACATGACGATACAGCGGAGCTCAAGAAACAGTTGCTGCCAATTCTTGAGGCCAACAAAGTAGATTTGTATGTCAATGGGCATTCCCATTGTCTGGAGGACATCCAAAGCAAGACAAGTTCCATGCATTTTCTGACCAGTGGAGGTGGTTCAAAAGCATGGGGAGGAGTAAGCTCAAGTGCAAACAAGGATGGATTGAACTTCTATTATGCTGGTCAAGGATTCATGTCCGTGCAAATTACAGCAACGTTTGTTAAAGCTGTATTCTATGACATTGATGGAAATTCACTTCATAGCGTAAACTTAACTAAAAATTAG___TTCTCAATTATCGAAAGAGTTGCAGTAGACGTTTAAGATGTTGTTATAAGCATTTGAGTATAATATCCAGTCAGGTGGTCATTGCATAGAGCCTTCAATGTTTCAAATTGCTGTTCTTCTTATTGTACCTGTTTTATGTTAATATGATACAATGGTGTTGCAAAATAACCCCTCGGGAGGC

Fln Alignment:

Contig4304___PPLKMAMELQAALHYSWRCIXXXXXXXXXXXS-NCIMAADPLKFLVVGDWGRKGLYNQSQVAAQMGKIAQPLNIDFVISTGDNFYEDGLNGTDDPSFKQSFSAIYTASSLQKPWHLVLGNHDYRGDTLSQLDPALKRRDDRWNCYR-----QNLPFSCKGASCSSVDFFFIDTTPFVDIYWTYTKHKYDWRGVQPRQPYLNKQLKDLNNTLKVSKTTWKIVVGHHPIRSIGSHDDTAELKKQLLPILEANKVDLYVNGHSHCLEDIQSKTSSMHFLTSGGGSKAWGGVSSSANKDGLNFYYAGQGFMSVQITATFVKAVFYDIDGNSLHSVNLTKN
B8LPI1______________PPLKMATELQSSLRCSCCCILMVLSMAFLLLPSNGIMAAAPLKFLVVGDWGRKGLFNQSQVAAQMGKIAQQLHIDFIISTGDNFYEDGLNGTDDPSFEQSFSAIYSASSLQTPWHLVLGNHDYRGDTLSQLDSALKRRDSRWNCYRTSTLRQNLPLSCKGARCSFLEFFFIDTTPFVDLYWTYAKHQYDWRGILPRERYLKKQLKALNNALKVSKATWKIVVGHHPIRSIGTHDDTAELKQQLLPILEANKVDLYVNGHAHCLQDFKSKTSSMHFLTSGGGSKAWGGVSSNANKDGLKFFYPGQGFMSMQITTMFVNAVFYDIDGNSLYSLNLSKS

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
870			14	85	0.993533
1200		14		85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain