SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene4044

Length: 708 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene4044

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	kinesin-like protein [Arabidopsis thaliana]	-	-	1.0e-08	45%
FL-Next	sp=Kinesin-4; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	44%
Blast2go	protein	-	-	1.69808e-09	67%

Source	GOs	Term	Type	e value	Identity
Blast2go	microtubule-based movement	GO:0007018	Biological Process	1.69808e-09	67%
Blast2go	ATP binding	GO:0005524	Molecular Function	1.69808e-09	67%
Blast2go	microtubule motor activity	GO:0003777	Molecular Function	1.69808e-09	67%
Blast2go	microtubule	GO:0005874	Cellular Component	1.69808e-09	67%

Source	InterPros	Term	Type	Identity
Sma3	Calponin homology domain	IPR001715	-	-
Sma3	Kinesin, motor domain	IPR001752	-	-
Sma3	Telomere end binding protein	IPR011564	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
96	33		66		1.0
101	16		83		0.994512
122		66		33	1.0
124		33	66		1.0
143	16		83		0.994512
144		16		83	0.994512
153	50		50		1.0
154			83	16	0.994512
158	33	66			1.0
170	16		83		0.994512
183	20		80		0.995493
190	80			20	0.995493
203	80		20		0.995493
211	40	60			1.0
243			25	75	0.996473
287		75	25		0.996473
289		25	75		0.996473
296		75		25	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain