SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene3262

Length: 784 nt

Origin of reads: Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene3262

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	wall-associated kinase 4-like [Oryza sativa Japonica Group] dbj\|BAG94677.1\| unnamed protein product [Oryza sativa Japonica Group]	-	-	4.0e-27	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	44%
Blast2go	probable serine threonine-protein kinase at1g18390-like	-	-	9.61145e-29	59%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Transferring phosphorous-containing groups, Protein-serine/threonine kinases.	EC:2.7.11.-	-	9.61145e-29	59%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein phosphorylation	GO:0006468	Biological Process	9.61145e-29	59%
Blast2go	ATP binding	GO:0005524	Molecular Function	9.61145e-29	59%
Blast2go	protein serine/threonine kinase activity	GO:0004674	Molecular Function	9.61145e-29	59%
Blast2go	cytoplasmic membrane-bounded vesicle	GO:0016023	Cellular Component	9.61145e-29	59%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Serine-threonine/tyrosine-protein kinase catalytic domain	IPR001245	-	-
Sma3	Endonuclease/exonuclease/phosphatase	IPR005135	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	C %	G %	T %	Probability
434	66		33	0.997452
497	66	33		0.997452
518	75	25		0.996473

SSRs (tot: 1)

Start position	End position	Sequence	Length
21	32	AG AG AG AG AG AG	12

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain