SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene2864

Length: 1582 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene2864

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	BAHD family acyltransferase, clade I n=3 Tax=Selaginella moellendorffii RepID=D8QNG1_SELML	-	-	3.99931e-42	30%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	68%
Blast2go	bahd family clade i	-	-	0.0	46%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Acyltransferases, Transferring groups other than amino-acyl groups.	EC:2.3.1.-	-	0.0	46%

Source	KEGGs	Term	Identity
Blast2go	Fatty acid biosynthesis	00061	46%
Blast2go	Tetracycline biosynthesis	00253	46%
Blast2go	Lysine degradation	00310	46%
Blast2go	Arginine and proline metabolism	00330	46%
Blast2go	Histidine metabolism	00340	46%
Blast2go	Tyrosine metabolism	00350	46%
Blast2go	Benzoate degradation	00362	46%
Blast2go	Lipopolysaccharide biosynthesis	00540	46%
Blast2go	Glycerophospholipid metabolism	00564	46%
Blast2go	Ether lipid metabolism	00565	46%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	46%
Blast2go	Toluene degradation	00623	46%
Blast2go	Naphthalene degradation	00626	46%
Blast2go	Aminobenzoate degradation	00627	46%
Blast2go	Ethylbenzene degradation	00642	46%
Blast2go	Butanoate metabolism	00650	46%
Blast2go	Methane metabolism	00680	46%
Blast2go	Limonene and pinene degradation	00903	46%
Blast2go	Diterpenoid biosynthesis	00904	46%
Blast2go	Carotenoid biosynthesis	00906	46%
Blast2go	Anthocyanin biosynthesis	00942	46%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	46%
Blast2go	Isoquinoline alkaloid biosynthesis	00950	46%
Blast2go	Tropane, piperidine and pyridine alkaloid biosynthesis	00960	46%
Blast2go	Betalain biosynthesis	00965	46%
Blast2go	Biosynthesis of unsaturated fatty acids	01040	46%
Blast2go	Biosynthesis of type II polyketide backbone	01056	46%
Blast2go	Biosynthesis of terpenoids and steroids	01062	46%
Blast2go	Metabolic pathways	01100	46%
Blast2go	Biosynthesis of secondary metabolites	01110	46%

Source	GOs	Term	Type	e value	Identity
Blast2go	transferase activity, transferring acyl groups other than amino-acyl groups	GO:0016747	Molecular Function	0.0	46%

Source	InterPros	Term	Type	e value	Identity
Sma3	Transferase	IPR003480	-	0.0	-

Full-Lengther Next Prediction

Fln status: Putative Complete

Fln database: coniferopsida.fasta

Fln subject: B8LQ10

Fln msg: Unexpected STOP codon in 5 prime region, your sequence is shorter than subject: 475 - 497

Fln protein: MLGVSTVVPAIPTEKHTMFLSSLDLFWIPVINSHSLLFYKLSPGMEFSTVTDMLKRSLSLVLVDFYPIAGRLSNKCSGETSRPEIDCNDCGVEFVEASIDVPFEDLEKDDFRHKSFFEQLIRIRDGSNFENYQGPFLSVQVTAFPGGGISIGATLHHVVTDGVGFWHFMTCWAECSRGSPISNRPEHIRTIFKREQKTNCGLPNISFRAQEVVTGDIKGAQIFKFMRDDLQPTNGEINGGKSDCDINSDSSVQKYKNHQIEDFEISRFHFDEEMIGKLKERAGARSSFVAVSAHFWRCVMKAREVPEEEAVDFGIIANSRGRVRPPLPATFFGNCACMGFVRTIAKQLLGQDIRFAAALIQELINSCTTEEQFSALVDWADSRIRNGSPLPSLALQTLGGRYFVGAGNSPKFPVYELDYGWGKPIRAQTAAINDIGGLMFFPGRDDGGRSIDIYTRLPRQQMETLKRILMIIPD*

Protein Length: 476

Fln nts: ATGGGGATGGTTATATCTGTTGAGTGAATATTTTCTCAGCGCCAAACGGATCTGTAAGCAGGCGACGACTATGGCTGAAGAGCAAGTAAAATAAAG_-_ATGTTGGGTGTTTCAACGGTGGTGCCGGCCATCCCCACTGAGAAGCATACCATGTTTCTCTCCAGCCTCGATTTGTTTTGGATTCCCGTTATTAACTCTCATTCCCTTCTGTTCTATAAATTAAGTCCAGGAATGGAGTTTAGTACTGTCACGGATATGCTCAAGAGGAGCCTCTCGTTAGTTCTGGTTGACTTTTATCCAATTGCCGGTCGGTTGAGCAACAAGTGTTCGGGAGAAACGAGTCGACCTGAAATTGACTGTAACGATTGCGGTGTGGAATTCGTGGAAGCATCGATCGATGTGCCTTTCGAGGACCTGGAAAAGGATGATTTTCGTCACAAGAGTTTTTTCGAGCAACTTATTCGTATCCGCGATGGTTCAAACTTTGAAAACTACCAAGGACCCTTTCTCTCGGTACAGGTGACTGCTTTTCCCGGAGGCGGAATCTCTATCGGAGCCACTCTTCACCACGTTGTTACAGACGGGGTTGGCTTTTGGCATTTCATGACTTGCTGGGCGGAATGTAGCAGGGGATCTCCTATTTCCAACAGACCTGAGCACATCAGAACAATCTTCAAGCGCGAACAGAAGACCAATTGCGGACTGCCCAACATTTCTTTCAGGGCTCAAGAAGTAGTCACCGGCGACATCAAGGGAGCTCAGATTTTCAAGTTCATGCGAGATGATTTACAGCCCACGAATGGGGAAATCAACGGCGGCAAAAGCGATTGCGACATTAATAGTGACAGCAGTGTCCAGAAATACAAGAACCACCAAATAGAGGACTTCGAGATTTCTCGTTTTCATTTTGATGAAGAAATGATTGGGAAGCTAAAGGAACGAGCCGGGGCTCGGAGTTCGTTTGTGGCTGTTAGCGCGCATTTTTGGAGATGCGTAATGAAAGCTCGAGAAGTCCCGGAAGAAGAGGCCGTTGATTTTGGAATCATTGCTAATAGCAGAGGCCGAGTAAGGCCCCCCTTACCCGCAACGTTTTTTGGCAACTGTGCATGCATGGGCTTTGTCAGAACCATAGCAAAACAGCTTCTGGGGCAAGATATCCGTTTCGCCGCCGCTCTCATCCAGGAGCTCATTAACTCCTGCACCACCGAAGAGCAGTTCAGTGCTCTGGTAGACTGGGCTGACAGCCGCATTCGAAATGGGAGCCCTCTGCCGAGCTTAGCACTACAAACCCTGGGAGGTCGTTACTTTGTCGGTGCAGGGAATTCTCCCAAATTTCCTGTTTATGAATTGGACTATGGGTGGGGTAAGCCAATTAGGGCGCAGACTGCAGCGATCAATGATATTGGAGGATTGATGTTCTTCCCAGGCAGGGACGATGGAGGAAGGAGTATCGATATTTACACTCGCCTTCCTCGTCAGCAGATGGAAACCTTGAAACGGATCCTCATGATAATTCCCGATTAAGCCTTGGCTGAATCGCTGAATCTGTGCCCCTGCGTTGCGTTTCATTTTGCGCGTTTTATTT

Fln Alignment:

Contig2864___KIKMLGVSTVVPAIPTEKHTMFLSSLDLFWIPVINSHSLLFYKLSPGMEFSTVTDMLKRSLSLVLVDFYPIAGRLSNKCSGETSRPEIDCNDCGVEFVEASIDVPFEDLEKDDFRHKSFFEQLIRIRDGSNFENYQGPFLSVQVTAFPGGGISIGATLHHVVTDGVGFWHFMTCWAECSRGSPISNRPEHIRTIFKREQKTNCGLPNISFRAQEVVTGDIKGAQIFKFMRDDLQPTNGEINGGKSDCDINSDSSVQKYKNHQIEDFEISRFHFDEEMIGKLKERAGARSSFVAVSAHFWRCVMKAREVPEEEAVDFGIIANSRGRVRPPLPATFFGNCACMGFVRTIAKQLLGQDIRFAAALIQELINSCTTEEQFSALVDWADSRIRNGSPLPSLALQTLGGRYFVGAGNSPKFPVYELDYGWGKPIRAQTAAINDIGGLMFFPGRDDGGRSIDIYTRLPRQQMETLKRILMIIPD
B8LQ10______________KVKMLCTSTVVPAVPTVKRSMFLSNLDLIWIPIANSHSVLFYKTNPEMEFTTVTDMLKRSLSSVLVDFYPVAGRLSTKASGETGRPEIDCNDGGVEFVEASIDMDIEDLEEDEFRHKSFFKELVPMRDGSKHENYDGPLFSVQVTGFRGGGICIGSSIHHVVADGSSFWHLMFCWAECCRGSPVSKKPEHMRTTFKREEKIDCATTNISFSAEEVVINNIEGAQIFKFVRDDLLTKDVEINVSKSEAD--KRRLLEFILKDQTEDLEICSFHFNEEMIEKLKERAGTSSSFVAVSAHFWICVTRAREVPDNEPVGFGMSANSRGRVKPPLPPTFLGNCICMGFAQTTAKQLLGQDIRFAATLIKELIKSCSSEGQVDNLIDWVDCRLGSGSPLPSLALEIIGGRYFVVAGNSPKFPVYELDYGWGKPLNAQIPTLNGVGAMMLFPGRDDG---IDIHTRLPPRQMETLKQILMIIPD

SNPs (tot: 5)

Position	A %	C %	G %	T %	Probability
1313		33		66	1.0
1432			60	30	1.0
1440			90	10	0.90298
1527	16		83		0.994512
1571	25			75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain