SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene2844

Length: 1728 nt

Origin of reads: Biogeco1 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene2844

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	UDP-glucosyltransferase, putative n=1 Tax=Ricinus communis RepID=B9SCH3_RICCO	-	-	40%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Blast2go	udp-glycosyltransferase 86a1	-	-	65%

Source	ECs	Term	Type	e value	Identity
Blast2go	Transferases, Glycosyltransferases, Hexosyltransferases.	EC:2.4.1.-	-	0.0	65%

Source	KEGGs	Term	Identity
Blast2go	Fructose and mannose metabolism	00051	65%
Blast2go	N-Glycan biosynthesis	00510	65%
Blast2go	Mucin type O-Glycan biosynthesis	00512	65%
Blast2go	Various types of N-glycan biosynthesis	00513	65%
Blast2go	Other types of O-glycan biosynthesis	00514	65%
Blast2go	Biosynthesis of 12-, 14- and 16-membered macrolides	00522	65%
Blast2go	Glycosaminoglycan biosynthesis - keratan sulfate	00533	65%
Blast2go	Lipopolysaccharide biosynthesis	00540	65%
Blast2go	Peptidoglycan biosynthesis	00550	65%
Blast2go	Glycerolipid metabolism	00561	65%
Blast2go	Glycosylphosphatidylinositol(GPI)-anchor biosynthesis	00563	65%
Blast2go	Sphingolipid metabolism	00600	65%
Blast2go	Glycosphingolipid biosynthesis - lacto and neolacto series	00601	65%
Blast2go	Glycosphingolipid biosynthesis - globo series	00603	65%
Blast2go	Glycosphingolipid biosynthesis - ganglio series	00604	65%
Blast2go	Carotenoid biosynthesis	00906	65%
Blast2go	Zeatin biosynthesis	00908	65%
Blast2go	Flavonoid biosynthesis	00941	65%
Blast2go	Anthocyanin biosynthesis	00942	65%
Blast2go	Flavone and flavonol biosynthesis	00944	65%
Blast2go	Stilbenoid, diarylheptanoid and gingerol biosynthesis	00945	65%
Blast2go	Betalain biosynthesis	00965	65%
Blast2go	Biosynthesis of type II polyketide products	01057	65%
Blast2go	Metabolic pathways	01100	65%
Blast2go	Biosynthesis of secondary metabolites	01110	65%

Source	GOs	Term	Type	e value	Identity
Blast2go	metabolic process	GO:0008152	Biological Process	0.0	65%
Blast2go	transferase activity, transferring hexosyl groups	GO:0016758	Molecular Function	0.0	65%

Source	InterPros	Term	Type	e value	Identity
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NVW6

Fln msg:

Fln protein: MARNPESLHAVVFPYPAQGHINPMMHLAKKLASKGVTVTFVNTHHRHQQITKANNHSAEQDDPLEKEALNAGLDIRSVQISDGLPLDFDRANRLIDFMRSVDNMAGELERLLQNLNKTGPAISCVIADSSLPWSCEVTKKLGIPWIAFWTQPTFLYSIHYHAHLLEDLRRNLYEGTADEGSISIDFIPGVPNLEARDLPSFIRQSDPESQLILDGMHRCFQVCREADWVLGNSFDDLERKEVNLNPPVLHIGPLLPSGFLNGEQSKDMRVGTSTWTECDCSKWLDAKPNRSVLYVSFGSMVFVTKAQLEEIAMGLKDSGQLFLWALRPDIVPSTVSDCLPHGFLNEIKGQGLVVPWCNQLQVLSHPSVEGFVTHCGWNSMLESIAGGVPMLGFPLWADQFTNSKLMADEWKIGYRLNSGKGLILKKEISRTIRKLFSDEATEVKKNVKALRDSARTAVRRGGSSDINIERFLEGLKGNRIRK*

Protein Length: 484

Fln nts: CGTCGTGACCTTGGCTGTCACTCAAATTAGTCCGCAGCCTGAACGTTGACATTGAAGCTCACAATCGAACAATTCA_-_ATGGCTCGCAATCCGGAATCCTTGCATGCCGTCGTGTTTCCATACCCAGCGCAAGGTCACATAAATCCCATGATGCACTTGGCGAAGAAACTTGCTTCCAAAGGTGTTACAGTCACGTTCGTTAACACGCACCACAGGCACCAGCAGATCACTAAGGCTAACAATCACAGTGCTGAACAAGACGACCCTCTTGAGAAGGAAGCGCTTAATGCTGGTCTTGATATTCGCTCTGTTCAAATCTCTGATGGATTACCTCTGGATTTCGATCGGGCAAACAGATTGATCGATTTTATGCGCTCCGTAGATAATATGGCAGGAGAGTTGGAACGACTCCTTCAAAATCTCAACAAGACAGGGCCGGCAATTTCTTGTGTCATAGCTGATAGTTCACTTCCATGGTCATGTGAAGTCACAAAGAAATTAGGTATTCCCTGGATTGCGTTTTGGACACAGCCTACCTTTCTTTATTCGATCCACTATCACGCACATCTGCTGGAGGATCTCCGTCGCAATCTTTATGAAGGAACCGCTGATGAGGGCAGCATTTCGATTGATTTTATTCCCGGCGTACCAAACTTAGAAGCAAGAGATCTTCCGTCCTTCATACGTCAGTCGGACCCCGAGTCACAGCTCATTCTTGATGGGATGCATAGGTGCTTTCAGGTATGTCGCGAAGCAGATTGGGTTCTTGGCAATTCTTTTGATGATCTCGAAAGAAAGGAAGTGAATTTGAACCCTCCGGTACTGCATATTGGTCCGTTGCTTCCCTCCGGTTTTTTGAACGGTGAACAATCCAAGGACATGAGAGTTGGAACGAGCACTTGGACAGAATGTGACTGTTCCAAGTGGCTGGATGCAAAGCCTAATCGTTCGGTCCTATACGTTTCCTTTGGGAGTATGGTTTTTGTCACTAAAGCTCAGCTGGAGGAAATAGCGATGGGTTTGAAGGACAGCGGGCAGTTGTTCCTCTGGGCTCTTCGTCCGGACATAGTCCCTTCAACAGTCTCAGACTGCTTACCCCACGGTTTTCTGAATGAGATAAAAGGGCAGGGGCTCGTTGTTCCATGGTGCAATCAACTGCAAGTGTTATCCCATCCGTCCGTTGAGGGATTCGTTACTCATTGCGGATGGAACTCAATGCTTGAAAGCATAGCTGGTGGAGTTCCCATGCTAGGTTTTCCATTGTGGGCAGATCAATTCACCAACAGCAAGCTCATGGCCGATGAATGGAAAATTGGATACAGATTGAACAGTGGGAAAGGACTGATACTAAAGAAAGAGATATCCAGAACTATCAGAAAATTGTTCAGTGACGAAGCGACGGAGGTAAAGAAAAATGTCAAGGCTCTAAGAGACAGCGCGAGGACTGCCGTGCGAAGAGGAGGATCTTCAGATATAAACATCGAGAGATTCCTAGAAGGTTTGAAGGGGAACCGTATCCGTAAATAA___CTGCATGATAGTGAACCATCTCACACATGTTTATCACTAGTATGACGCATGATGTTTTAGCTGAGATTATAAACGTTTTAGTTGAATTTATAAATGTTTTAGCTGAGTTATAAATGTTTTAGTTGAATTTCGCTGAGTTTATAAATGTTTTAGTTGAATTTATACAAAATTCTTTGTATAAATTGGAAGTTATTCAAATTCGG

Fln Alignment:

Contig2844___MARNPESLHAVVFPYPAQGHINPMMHLAKKLASKGVTVTFVNTHHRHQQITKANNHSAEQDDPLEKEALNAGLDIRSVQISDGLPLDFDRANRLIDFMRSVDNMAGELERLLQNLNKTGPAISCVIADSSLPWSCEVTKKLGIPWIAFWTQPTFLYSIHYHAHLLEDLRRNLYEGTADEGSISIDFIPGVPNLEARDLPSFIRQSDPESQLILDGMHRCFQVCREADWVLGNSFDDLERKEVNLNPPVLHIGPLLPSGFLNGEQSKDMRVGTSTWTECDCSKWLDAKPNRSVLYVSFGSMVFVTKAQLEEIAMGLKDSGQLFLWALRPDIVPSTVSDCLPHGFLNEIKGQGLVVPWCNQLQVLSHPSVEGFVTHCGWNSMLESIAGGVPMLGFPLWADQFTNSKLMADEWKIGYRLNSG-----KGLILKKEISRTIRKLFSDEATEVKKNVKALRDSARTAVRRGGSSDINIERFLEGLKGNRIRK
A9NVW6______________MARNPEHLHALVFPYPTQGHITPMMQFAKKLASKGVIVTFLTTHHRHQQITKAHTLSAEQDDPIEQEARKLGLDIRSAQISDGLPLDFDRSARFNDFMRSVDNMGGELEQLLHNLNKTGPAVSCVIADTILPWSFEIAKKLGIPWISFWTQPTVLYSIYYHAHLLEDLRHSLCEGTADEGSISIDYIPGVPTLKTRDLPSFIREGDADSQYILNVLRKSFQLSREADWVLGNSFDDLESKSVHLKPPVLQVGPLLPSSFLNSEHSKDIGVGTSIWTQYDASEWLDAKPNGSVIYVSFGSLIHATKTQLEEIATGLKDSGEFFLWVLRPDIVSSTVSDCLPDGFLDEIKRQGLVVPWCNQLQVLSHPSVAGFITHCGWNSMLESIALGVPMIGFPFWADQFTNSKLMAHEWKIGYRFNGGGQAGDKGLIVRKDISSAIRKLFSEERTEVKKNVEGLRDSARAAVRDGGSSDKNIERFVEGLKGRCISK

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
1024	66		33		0.997452
1033		75	25		0.996473
1267	33		66		0.997452
1293		33		66	0.997452
1295			33	66	0.997452
1296		66		33	0.997452
1326	33		66		0.997452
1328	33		66		0.997452
1350	25		75		0.996473
1364	25		75		0.996473
1419	66		33		0.997452
1498		20	80		0.995493
1525	83	16			0.994512
1546		66		33	1.0
1565	33	66			1.0
1566			66	33	1.0
1571	66			33	1.0
1584		25		75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain