SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene2347

Length: 1551 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene2347

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Fructose-1,6-bisphosphatase, putative n=1 Tax=Ricinus communis RepID=B9SPG7_RICCO	-	-	79%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	54%
Blast2go	fructose- -bisphosphatase	-	-	91%

Source	ECs	Term	Type	e value	Identity
Blast2go	Fructose-bisphosphatase.	EC:3.1.3.11	-	0.0	91%

Source	KEGGs	Term	Type	Identity
Blast2go	Glycolysis / Gluconeogenesis	00010		91%
Blast2go	Pentose phosphate pathway	00030		91%
Blast2go	Fructose and mannose metabolism	00051		91%
Blast2go	Methane metabolism	00680		91%
Blast2go	Carbon fixation in photosynthetic organisms	00710		91%
Blast2go	Biosynthesis of phenylpropanoids	01061		91%
Blast2go	Metabolic pathways	01100		91%
Blast2go	Biosynthesis of secondary metabolites	01110		91%
Blast2go	2-alkenal reductase.	EC:1.3.1.74	-	91%

Source	GOs	Term	Type	Identity
Blast2go	reductive pentose-phosphate cycle	GO:0019253	Biological Process	91%
Blast2go	photosynthetic electron transport in photosystem I	GO:0009773	Biological Process	91%
Blast2go	response to cold	GO:0009409	Biological Process	91%
Blast2go	sucrose metabolic process	GO:0005985	Biological Process	91%
Blast2go	fructose 1,6-bisphosphate metabolic process	GO:0030388	Biological Process	91%
Blast2go	metal ion binding	GO:0046872	Molecular Function	91%
Blast2go	fructose 1,6-bisphosphate 1-phosphatase activity	GO:0042132	Molecular Function	91%
Blast2go	2-alkenal reductase [NAD(P)] activity	GO:0032440	Molecular Function	91%
Blast2go	chloroplast stroma	GO:0009570	Cellular Component	91%
Blast2go	stromule	GO:0010319	Cellular Component	91%
Blast2go	apoplast	GO:0048046	Cellular Component	91%

Source	InterPros	Term	Type	Identity
Sma3	Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase	IPR000146	-	-
Sma3	Synaptobrevin	IPR001388	-	-
Sma3	Longin	IPR010908	-	-
Sma3		IPR017955	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LKA9

Fln msg: your sequence is longer than subject: 428 - 342

Fln protein: MATAFSSHLLICNSSSADSSQAAATAGLSYITSSLSSSSIFSANIWPQKKNVLSIKRPFCPRATVASDKATKTQEEKQQTPKKKGMYDIQTFTNWLLKQEQSGVIDGELTVVLSSIALACKQIASLVQRAGISNLTGLQGGMNVQGEDQKKLDVVSNEVFCSCLRSSGRTGIIASEEEDVPVAVEESYSGNYVVVFDPLDGSSNVDAAVSTGSIFGIYNPNDECIVDSDDENELGQVEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLSVGKGVYGFTLDPMYGEFVMTHVDIKIPKKGSIYSFNEGNYQLWDDKLKKYMDDLKNPSLQPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPSDKKSVNGKLRLLYECAPMSYLAEQAGGKGSDGHERVLDIHPEEVHQRVPLYIGSVEEVEKLEKYLS*

Protein Length: 429

Fln nts: TTTTATCACCAACGTCTGAGCAGAGCAGCC_-_ATGGCGACTGCATTCTCCTCCCATCTTCTAATCTGCAATTCTTCTTCTGCTGATTCATCCCAGGCAGCAGCCACTGCCGGCCTCAGCTATATCACATCCTCATTATCATCTTCATCAATATTTTCTGCAAACATTTGGCCACAGAAAAAGAATGTGTTGAGTATAAAGAGACCATTTTGTCCAAGGGCCACAGTGGCTTCGGACAAGGCCACCAAAACACAGGAAGAGAAGCAGCAAACGCCGAAGAAGAAGGGAATGTATGACATACAGACTTTCACTAATTGGTTACTGAAACAAGAGCAAAGTGGTGTTATAGATGGTGAACTTACTGTTGTCTTATCAAGTATTGCATTGGCCTGCAAGCAGATTGCTTCCCTGGTGCAAAGAGCTGGAATATCCAATCTCACAGGTCTCCAGGGTGGAATGAATGTGCAGGGGGAGGATCAGAAGAAGCTAGATGTTGTCTCAAATGAGGTATTTTGCAGTTGCTTGAGGTCAAGTGGCAGAACAGGAATTATTGCTTCGGAAGAAGAGGATGTTCCTGTGGCTGTAGAGGAGAGCTACTCTGGCAACTACGTTGTTGTCTTTGATCCACTGGATGGTTCCTCAAACGTTGATGCAGCTGTCTCCACAGGGTCTATTTTTGGAATTTACAATCCTAATGACGAATGTATTGTCGACAGTGACGATGAGAATGAGCTTGGTCAGGTGGAGCAAAGGTGCATTGTGAATGTGTGCCAACCAGGGAGCAATCTGTTGGCTGCAGGGTACTGCATGTATTCCAGTTCTGTGATTTTTGTTTTATCAGTGGGTAAGGGGGTTTATGGCTTTACTTTGGATCCCATGTATGGTGAATTTGTAATGACCCATGTAGACATAAAGATTCCTAAGAAAGGAAGCATCTATTCCTTCAATGAAGGCAACTACCAGCTGTGGGATGACAAGCTAAAAAAGTACATGGACGATCTCAAGAATCCTTCTCTTCAGCCTTCTGGAAAGCCTTACTCTGCTCGTTACATTGGCAGCCTGGTGGGTGATTTCCACAGGACTCTGTTGTATGGTGGGATCTATGGATATCCTTCTGACAAGAAAAGTGTCAATGGGAAGCTCAGACTTCTGTATGAATGTGCTCCAATGAGTTATCTAGCAGAGCAAGCGGGTGGTAAAGGATCCGATGGCCATGAAAGGGTTCTCGACATACACCCAGAAGAGGTTCATCAAAGAGTACCTTTGTACATTGGAAGTGTTGAAGAAGTTGAAAAGCTGGAAAAATATTTAAGTTGA___TTTTCCATATAAGCAGCAGCTAAGCTTTGTTTCAAATCTTCGTATGCAATGTTTGTGTTTTATTCCTGAGATTTTCTGGAAGGAATATATGCAGGGCTTCATAAGTAATAGCCATTTATAGTTGAAGTATTAATTATGATTTTTTTATCCGAAGTTTTTGTTTCAAGTTGAGCACAGGAGATTATCCATAGCGTAATGGTAAAGTGCTAATGCTAAGTCCAGATGAGGGAGTCTAAT

Fln Alignment:

Contig2347___DIQTFTNWLL-KQEQSGVIDGELTVVLSSIALACKQIASLVQRAGISNLTGLQGGMNVQGEDQKKLDVVSNEVFCSCLRSSGRTGIIASEEEDVPVAVEESYSGNYVVVFDPLDGSSNVDAAVSTGSIFGIYNPNDECIVDSDDENELGQVEQRCIVNVCQPGSNLLAAGYCMYSSSVIFVLSVGKGVYGFTLDPMYGEFVMTHVDIKIPKKGSIYSFNEGNYQXXXXXXXXXXXXXXNPSLQPSGKPYSARYIGSLVGDFHRTLLYGGIYGYPSDKKSVNGKLRLLYECAPMSYLAEQAGGKGSDGHERVLDIHPEEVHQRVPLYIGSVEEVEKLE
B8LKA9______________DLMTITRFVLNEQSKHPEARGDFTILLSNIVLGCKFVCSAVSKAGLAKLIGLAGEINVQGEEQKKLDVLSNEVFIKALISSGRTSILVSEENEQATFVEPSKRGRYCVVFDPLDGSSNIDCGVSIGTIFGIYLRKD------DSEGTLN--------DVLQPGKNMVAAGYCMYGSSCTLVLSTGTGVNGFTLDPSLGEFILTHPDIKVPKKGKIYSVNEGNAKNWDEPTKKYVERCKFP--EDGSSPKSLRYIGSMVADVHRTLLYGGIFMYPADKKSPNGKLRTLYEVFPMSFLMEQAGGQAFTGTGRALDIVPTTIHQRSPIFLGSFEEVEEIK

SNPs (tot: 19)

Position	A %	C %	G %	T %	Probability
677			75	25	0.996473
680	75			25	0.996473
697	12	87			0.992554
698			87	12	0.992554
699	87		12		0.992554
700	87			12	0.992554
904	90			10	0.90298
905	10		90		0.90298
910	90			10	0.90298
980	88	11			0.923564
982	88			11	0.923564
983	88			11	0.923564
1010		11		88	0.923564
1045		10		90	0.90298
1057		90		10	0.90298
1297	11		88		0.923564
1317	12			87	0.992554
1403		10		90	0.90298
1406			90	10	0.90298

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain