SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene1444

Length: 800 nt

Origin of reads: Biogeco1 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene1444

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	lipid-binding START domain-containing protein [Arabidopsis thaliana] gb\|AAW38977.1\| At5g49800 [Arabidopsis thaliana] gb\|AED95857.1\| lipid-binding START domain-containing protein [Arabidopsis thaliana]	-	-	57%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	lipid-binding start domain-containing protein	-	-	73%

Source	InterPros	Term	Type	e value	Identity
Sma3	Lipid-binding START	IPR002913	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 3)

Position	A %	G %	T %	Probability
505	23	76		1.0
668		83	16	0.994512
669		16	83	0.994512

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain