SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene1307

Length: 1021 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene1307

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Sentrin/sumo-specific protease, putative n=1 Tax=Ricinus communis RepID=B9SH87_RICCO	-	-	4.0e-32	63%
FL-Next	sp=Ubiquitin-like-specific protease 1D; Arabidopsis thaliana (Mouse-ear cress).	-	-	0.0	53%
Blast2go	cysteine-type peptidase	-	-	1.37486e-37	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein desumoylation	GO:0016926	Biological Process	1.37486e-37	71%
Blast2go	proteolysis	GO:0006508	Biological Process	1.37486e-37	71%
Blast2go	response to salt stress	GO:0009651	Biological Process	1.37486e-37	71%
Blast2go	vegetative to reproductive phase transition of meristem	GO:0010228	Biological Process	1.37486e-37	71%
Blast2go	SUMO-specific protease activity	GO:0016929	Molecular Function	1.37486e-37	71%
Blast2go	nucleus	GO:0005634	Cellular Component	1.37486e-37	71%

Source	InterPros	Term	Type	e value	Identity
Sma3	Peptidase C48, SUMO/Sentrin/Ubl1	IPR003653	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 5)

Position	A %	G %	T %	Probability
395	40		60	1.0
397	60	40		1.0
398		40	60	1.0
399		40	60	1.0
774	75	25		1.0

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain