SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene1280

Length: 898 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene1280

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	ABC-2 type transporter-like protein [Arabidopsis thaliana] sp\|Q9ZUU9.2\|AB3G_ARATH RecName: Full=ABC transporter G family member 3; Short=ABC transporter ABCG.3; Short=AtABCG3; AltName: Full=White-brown complex homolog protein 3; Short=AtWBC3 gb\|AEC08075.1	-	-	1.4013e-45	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	76%
Blast2go	white-brown-complex abc transporter family	-	-	0.0	76%

Source	GOs	Term	Type	Identity
Blast2go	ATPase activity, coupled to transmembrane movement of substances	GO:0042626	Molecular Function	76%
Blast2go	nucleotide binding	GO:0000166	Molecular Function	76%
Blast2go	plasma membrane	GO:0005886	Cellular Component	76%

Source	InterPros	Term	Type	Identity
Sma3	ABC transporter-like	IPR003439	-	-
Sma3	AAA+ ATPase domain	IPR003593	-	-
Sma3	ABC-2 type transporter	IPR013525	-	-
Sma3	ABC transporter, conserved site	IPR017871	-	-

Full-Lengther Next Prediction

SNPs (tot: 2)

Position	A %	C %	G %	T %	Probability
564		14		85	0.993533
640		14		85	0.993533

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain