SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene1028

Length: 1177 nt

Origin of reads: Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene1028

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein	-	-	80%

Source	InterPros	Term	Type	e value	Identity
Sma3	MATH	IPR002083	-	0.0	-
Sma3	Protein of unknown function DUF789	IPR008507	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 33)

Position	A %	C %	G %	T %	Probability
680	25		75		1.0
701		87	12		0.992554
735		12		87	0.992554
738		12		87	0.992554
739	87		12		0.992554
740	87			12	0.992554
741			12	87	0.992554
744		12		87	0.992554
747			12	87	0.992554
748	87		12		0.992554
750			12	87	0.992554
751		75		25	1.0
753	12		12	75	0.975346
754		12		87	0.992554
755			12	87	0.992554
756	87	12			0.992554
757	12	12	75		0.975346
758		12	87		0.992554
761	87		12		0.992554
762		12		87	0.992554
765	87			12	0.992554
768	87	12			0.992554
770		12		87	0.992554
771	12		87		0.992554
821	85	14			0.993533
895	85		14		0.993533
935	12		87		0.992554
941	87		12		0.992554
969		12	87		0.992554
1028	75		25		1.0
1088			25	25	0.995533
1089	25		75		0.996473
1094		33		66	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain