SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene589

Length: 932 nt

Origin of reads: Biogeco1 v2 Biogeco2 v2 Biogeco3 v1 Uagpf v2 Uma v2

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene589 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Unassigned protein	-	-	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	90%
Blast2go	uncharacterized protein	-	-	56%

Source	GOs	Term	Type	e value	Identity
Blast2go	plastid	GO:0009536	Cellular Component	0.0	56%

Full-Lengther Next Prediction

SNPs (tot: 35)

Position	A %	C %	G %	T %	Probability
371	11			88	0.923564
436	33		66		1.0
446	88	11			0.923564
448		11	88		0.923564
449	11		88		0.923564
450		88		11	0.923564
489	12		87		0.992554
530		14	85		0.993533
531		14	85		0.993533
564	66	33			1.0
615		16		83	0.994512
617	83	16			0.994512
618	16	83			0.994512
640		80		20	0.995493
658	80	20			0.995493
659	80	20			0.995493
660	80	20			0.995493
661	20	80			0.995493
803	22		77		0.999999
804	66		33		1.0
847			83	16	0.994512
849	16	83			0.994512
850		83	16		0.994512
851			83	16	0.994512
853	16			83	0.994512
856		16		83	0.994512
858	16			83	0.994512
860		83	16		0.994512
862		16		83	0.994512
863	16	83			0.994512
864		16		83	0.994512
867	83	16			0.994512
868			16	83	0.994512
888		25		75	0.996473
919		33	66		0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain