SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene92384

Length: 527 nt

UniGene Fasta

>sp_v2.0_unigene92384
AGTTTGCATGGGGTTTGGAGGCAAGCAATCTACCCTTCCTGTGGGCTATTAGACCGGACCTCGTTCAGGGGCACTCTGCTGTGCTGCCTCAGGATTTCATGGAGAGAAGCCAGGGCCGCGGCTTCTTTGTTACTTGGGCACCGCAATCTAATGTCCTTTCCCACACCTCTGTGGGAGGATTTCTGACACACAGCGGTTGGAACTCCACTGTCGAGAGCATATGCGCGGGTGTTCCCATGATCTGCTGGCCCTTCTTTGCCGAACAGCAGACAAACAGGAGGTTTGTTGATCATATTTGGAAAATCGGATTCGAGATGCCGGAGGAGGTGTCCAGAGAAAACGTGGAGGCATTGGTGAGGAAACTGATGAATCCACACGATGAGGAAGTAAAGATTATGAGGAAAAACATAATGGAGCTTAGGGATAGCGCAATTTTAGCAGGTCGGGTTGGCGGATCTTCTTACAACAACATGAAGAAGTTTTTTCACCAGATAGTGCAGGAAGCGCAGTCATAATTCCGATTTGGA

Ace file of the UniGene sp_v2.0_unigene92384

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	UDP-glucuronosyltransferase n=1 Tax=Pisum sativum RepID=Q8L5C7_PEA	-	-	4.2039e-45	51%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	67%
Blast2go	udp-glucosyltransferase family protein	-	-	0.0	70%

Source	InterPros	Term	Type	Identity
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	UDP-glucuronosyl/UDP-glucosyltransferase	IPR002213	-	-
Sma3	Phosphopantetheine attachment site	IPR006162	-	-
Sma3	Peroxidases heam-ligand binding site	IPR019793	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NVD1

Fln msg: your sequence is shorter than subject: 171 - 298

Fln protein: FAWGLEASNLPFLWAIRPDLVQGHSAVLPQDFMERSQGRGFFVTWAPQSNVLSHTSVGGFLTHSGWNSTVESICAGVPMICWPFFAEQQTNRRFVDHIWKIGFEMPEEVSRENVEALVRKLMNPHDEEVKIMRKNIMELRDSAILAGRVGGSSYNNMKKFFHQIVQEAQS*

Protein Length: 172

Fln nts: AGTTTGCATGGGGTTTGGAGGCAAGCAATCTACCCTTCCTGTGGGCTATTAGACCGGACCTCGTTCAGGGGCACTCTGCTGTGCTGCCTCAGGATTTCATGGAGAGAAGCCAGGGCCGCGGCTTCTTTGTTACTTGGGCACCGCAATCTAATGTCCTTTCCCACACCTCTGTGGGAGGATTTCTGACACACAGCGGTTGGAACTCCACTGTCGAGAGCATATGCGCGGGTGTTCCCATGATCTGCTGGCCCTTCTTTGCCGAACAGCAGACAAACAGGAGGTTTGTTGATCATATTTGGAAAATCGGATTCGAGATGCCGGAGGAGGTGTCCAGAGAAAACGTGGAGGCATTGGTGAGGAAACTGATGAATCCACACGATGAGGAAGTAAAGATTATGAGGAAAAACATAATGGAGCTTAGGGATAGCGCAATTTTAGCAGGTCGGGTTGGCGGATCTTCTTACAACAACATGAAGAAGTTTTTTCACCAGATAGTGCAGGAAGCGCAGTCATAA___TTCCGATTTGGA

Fln Alignment:

uma_euler_37330___AWGLEASNLPFLWAIRPDLVQGHSAVLPQDFMERSQGRGFFVTWAPQSNVLSHTSVGGFLTHSGWNSTVESICAGVPMICWPFFAEQQTNRRFVDHIWKIGFEMPEEVSRENVEALVRKLMNPHDEEVKIMRKNIMELRDSAILAGRVGGSSYNNMKKFFHQI
A9NVD1_______________AWGLEASNQPFLWVIRPDLIHGHSAVLPSEFLEKVKDRSFLVRWAPQMKVLSHPSVGGFLTHSGWNSTLESICAGVPMISWPFLAEQPTNRRFVSGVWNIGMAMNEVVRREDVEDMVRRLMN--GEEGRQMRKRIGELRDESMRAVGKGGSSYNNMEKFLKEI

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain