SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91696

Length: 1582 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene91696

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Kinesin-like protein heavy chain n=3 Tax=Arabidopsis RepID=Q8W1Y3_ARATH	-	-	81%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	38%
Blast2go	kinesin-like protein 1	-	-	87%

Source	GOs	Term	Type	e value	Identity
Blast2go	aerobic respiration	GO:0009060	Biological Process	0.0	87%
Blast2go	mitochondrion	GO:0005739	Cellular Component	0.0	87%

Source	InterPros	Term	Type	Identity
Sma3	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	IPR000194	-	-
Sma3	Bet v I domain	IPR000916	-	-
Sma3	Calponin homology domain	IPR001715	-	-
Sma3	Kinesin, motor domain	IPR001752	-	-
Sma3	Telomere end binding protein	IPR011564	-	-
Sma3	Nucleic acid-binding, OB-fold	IPR012340	-	-
Sma3	Mitochondrial substrate/solute carrier	IPR018108	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ACB2

Fln msg: query STOP codon too far from subject stop. Distance to subject end: 259 aas, putative chimeric sequence, your sequence is shorter than subject: 88 - 509

Fln protein: GDVIAALAQKSSHVPYRNSKLTQLLQDSLGGQAKALMFAHISPETDAYNESLSTLKFAERVATVELGAARSIKKVERFESSRSRFII*

Protein Length: 89

Fln nts: GGGGATGTCATTGCTGCACTTGCACAAAAGAGTTCACATGTCCCTTATCGGAATAGCAAGCTAACACAGTTACTTCAAGATTCCTTAGGGGGACAGGCAAAAGCTCTTATGTTTGCCCATATAAGTCCTGAAACAGATGCCTATAATGAGTCACTCAGCACCCTTAAGTTTGCAGAGCGAGTAGCTACCGTTGAACTTGGTGCAGCACGTTCCATAAAGAAAGTGGAGAGATTCGAGAGCTCAAGGAGCAGATTTATAATTTAA___GAGTTGCACTAGCAAAAAAGGAAGCTGAAGTAGAACAGTTCCAAAGTAATCGAAGCACTGAAAAACAAAGGATGAAGGTTGGAGTATCACCATTGCATTCACATAGGCAAAGCAGAGATATTCAAGCACTGTCAAACCGTAGACAGCCAATGGAAGAGGTTGGAAACATAGAGGTTAGAAGCAGTTCCACCGGAAGGCAGAGGAAACCAATCTATGGCAGGGATGTTTTAGGGGAGGGCGCTGATGCAAATTCTCCAAGACCAATCCGTCGATCTTCTCCAGAGAGAAGATCGTTATCTGTTGAAAGGAGATCATTGTCTGCTGATCGTGGAAATCACATAAGGAACAGAGTTAAGCATGATCCATTGGAAGAACAAGAAGTAAGAAAGTGGCAAGACAAGGTGACGGTCAATAAATATTTAACAATTCACACAGCAGCTTCACAGGATGATTCCTTGAGACCAATGGAAGCTTGTGAATTAGCAAAGCAAGACAGCATTTCTGATATGTTCTACCAAAGGTGCCATGCTAATCCAAGGAAAATATATCCAGAGAGAGAAGACAGACAATTCTCGATGGATCACAATGAAGGGTATGGAGGAGTAAAGAGGAATAAAGTTGATGTAAAAGGGAAGAATGAATATCAAGTGCGAAGAACTCCTCACCATGAAACATCAAATACAGATGAATCAGATGTAGATCTGTTTCGAACTAGTGATTTCTCTGAAGCAGATTTGTTGCAATTTAAGGAACTTAATCTTATTGACGTAGCTCCCATACAACATGTTCCACGAATCAGAAAGACAATGCAATCCTCTACAAGGACCACTCATCACATAGAGCGGAGAAGTCCAATCCAAGCAAAAAGCCCTTCTTCAGCAAGCAGATTTGAAATCTCTAAAAGAGGACGGATGTGTTCACGTATCACGTTGGAGTTCAAATGATAGAGATATATAATGAGCAAGTGAGAGATCTTCTTGCCACGGACGGTTCCAACCGGAGGCTAGAAATCCGCAACAATTCTCAGCAGAATGGACTCAATGTACCCGATGCAAATTTGGTATCAGTTACATCCACATTCGACGTTATCAATTTGATGAACATTGGACAAAAGAATCGTGTCGTTGGAGCAACTGCTTTGAATGATCGTAGCAGTCGTTCACACAGTGTTTTGACAGTGCATGTCCAAGGAACAGATTTGACCACAGGGTCCATCCTTCGAGGATGCCTTCATTTGGTGGACCTTGCTGGAAGTGAGAGGGTAGATAAATCTGAGGCTACAGGAGACCGGTTGAAGGAAGCCCAACACATCAATAAA

Fln Alignment:

uma_euler_14006___DVIAALAQKSSHVPYRNSKLTQLLQDSLGGQAKALMFAHISPETDAYNESLSTLKFAERV
D5ACB2_______________ECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSRTVMISCVSPNSGSCEHTLNTLRYADRV

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain