SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91692

Length: 395 nt

UniGene Fasta

>sp_v2.0_unigene91692
GAAATGTTTGTCAAAGAGCATTTTAAAAAACGCGGTCATTATATTCTTCGTGCATGCGATGCATATATGAAAGGGGCTCAAGTCGGATCACTTTCAGAAGATTGCATGTTGCCATCAAATGCTGGGACAGTGTCTGAGAATCAGAATCCTAGTTCTGCTGGCTTCAAGCTTATGTTACGTAAAATTATTCCAAAACTTATTTCAGCCTTAAGTGAAACAGGAGTAGAGTGCCAAGAATTTCAACAGTCTATACCCAAAGAATCTGAGGTATTATGTGGATTATAAGGTAAGCATTTAAACTTGGGTGCTAATAATGGACAAATACCATAAAAACTTGTGTGCTAATAATGAGTAAATGCCATCAGGAAGTTGATGCGACTACGAATTAGTTAACA

Ace file of the UniGene sp_v2.0_unigene91692

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	putative ubiquitin-conjugating enzyme E2 23 [Arabidopsis thaliana] sp\|Q9ZVX1.1\|UBC23_ARATH RecName: Full=Probable ubiquitin-conjugating enzyme E2 23; AltName: Full=Ubiquitin carrier protein 23 gb\|AAC64223.1\| putative ubiquitin-conjugating enzyme [Arabidop	-	-	4.0e-18	56%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	55%
Blast2go	probable ubiquitin-conjugating enzyme e2 23-like	-	-	2.12725e-22	67%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ubiquitin-conjugating enzyme, E2	IPR000608	-	0.0	-
Sma3	Ubiquitin-conjugating enzyme/RWD-like	IPR016135	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9P2M6

Fln msg: atg_distance in limit (1-15): atg_distance = 16,

Fln protein: MFVKEHFKKRGHYILRACDAYMKGAQVGSLSEDCMLPSNAGTVSENQNPSSAGFKLMLRKIIPKLISALSETGVECQEFQQSIPKESEVLCGL*

Protein Length: 95

Fln nts: GAA_-_ATGTTTGTCAAAGAGCATTTTAAAAAACGCGGTCATTATATTCTTCGTGCATGCGATGCATATATGAAAGGGGCTCAAGTCGGATCACTTTCAGAAGATTGCATGTTGCCATCAAATGCTGGGACAGTGTCTGAGAATCAGAATCCTAGTTCTGCTGGCTTCAAGCTTATGTTACGTAAAATTATTCCAAAACTTATTTCAGCCTTAAGTGAAACAGGAGTAGAGTGCCAAGAATTTCAACAGTCTATACCCAAAGAATCTGAGGTATTATGTGGATTATAA___GGTAAGCATTTAAACTTGGGTGCTAATAATGGACAAATACCATAAAAACTTGTGTGCTAATAATGAGTAAATGCCATCAGGAAGTTGATGCGACTACGAATTAGTTAACA

Fln Alignment:

uma_euler_13957___EMFVKEHFKKRGHYILRACDAYMKGAQVGSLSEDCMLPSNAGTVSENQNPSSAGFKLMLRKIIPKLISALSETGVECQEF
A9P2M6_______________ESFVREHFHQRGHYILGACNAYMMGAQVGCLSGEAMMGVHGR--ADTQSTSSIGFKIMLAKLIPKLVLAFKEVGADCEEF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain