SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91643

Length: 381 nt

UniGene Fasta

>sp_v2.0_unigene91643
AAGGAGTACCTGTCCTTGTACTACCAGAACGATGGTGCAGTGGAATCTGATACAGAGCTTCAGTCATGGTGGGGCGAAATCAGAAATGTTGGTCATGGAGACAAGAAGGCCGAGACATGGTGGTACAGCATGGAGACCATTGAAGAAGTTGAAAAGACATTAACAACGATCATATGGGTGGCCTCGGCTCTTCACGCTGCAGTCAATTTTGGGCAATATCCTTACGCTGGATACATGCCTAATCGGTCCAGCATGAGCAGAAGGTTTATCCCCGAAGAAGGGTCCCCAGAATTCTCAGACCTGGTGGAGAATCCGGACCGAGTTATACTCAGAACGACAAGCAACCAATTTCAAACAACCCTGAACATGGCCCTCATTGAA

Ace file of the UniGene sp_v2.0_unigene91643

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Lipoxygenase (Fragment) n=5 Tax=Vitis vinifera RepID=D7U236_VITVI	-	-	2.00386e-43	62%
FL-Next	sp=Lipoxygenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	59%
Blast2go	lipoxygenase	-	-	0.0	77%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Lipoxygenase	IPR000907	-	-
Sma3	Lipoxygenase, LH2	IPR001024	-	-
Sma3	Lipoxygenase, plant	IPR001246	-	-
Sma3	Lipoxygenase, C-terminal	IPR013819	-	-
Sma3	Hemopexin/matrixin, conserved site	IPR018486	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: B8LLK5

Fln msg: Distance to subject end: 93 aas, your sequence is shorter than subject: 127 - 930

Fln protein: KEYLSLYYQNDGAVESDTELQSWWGEIRNVGHGDKKAETWWYSMETIEEVEKTLTTIIWVASALHAAVNFGQYPYAGYMPNRSSMSRRFIPEEGSPEFSDLVENPDRVILRTTSNQFQTTLNMALIE

Protein Length: 128

Fln nts: AAGGAGTACCTGTCCTTGTACTACCAGAACGATGGTGCAGTGGAATCTGATACAGAGCTTCAGTCATGGTGGGGCGAAATCAGAAATGTTGGTCATGGAGACAAGAAGGCCGAGACATGGTGGTACAGCATGGAGACCATTGAAGAAGTTGAAAAGACATTAACAACGATCATATGGGTGGCCTCGGCTCTTCACGCTGCAGTCAATTTTGGGCAATATCCTTACGCTGGATACATGCCTAATCGGTCCAGCATGAGCAGAAGGTTTATCCCCGAAGAAGGGTCCCCAGAATTCTCAGACCTGGTGGAGAATCCGGACCGAGTTATACTCAGAACGACAAGCAACCAATTTCAAACAACCCTGAACATGGCCCTCATTGAA

Fln Alignment:

uma_euler_12766___EYLSLYYQNDGAVESDTELQSWWGEIRNVGHGDKKAE-TWWYSMETIEEVEKTLTTIIWVASALHAAVNFGQYPYAGYMPNRSSMSRRFIPEEGSPEFSDLVENPDRVILRTTSNQFQTTLNMALIE
B8LLK5_______________DYLSLYYKDDASIKRDQELQAWWNEIVNVGHGDLKDDPSRWYKMETKEEVVEAVTTIIWIASAHHAAVNFGQYSYGGYMPNLPTMSRRLIPEKGSEEYSEMLRDVDAYFLRTVSTPRQATLIMAVLE

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain