SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91629

Length: 1458 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene91629

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Ribosomal L.8/L5e family protein [Arabidopsis thaliana] dbj\|BAC43701.1\| unknown protein [Arabidopsis thaliana] gb\|AAO39958.1\| At1g08850 [Arabidopsis thaliana] gb\|AEE28358.1\| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]	-	-	77%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	94%
Blast2go	protein	-	-	86%

Source	GOs	Term	Type	e value	Identity
Blast2go	cell part	GO:0044464	Cellular Component	0.0	86%

Source	InterPros	Term	Type	e value	Identity
Sma3	Ribosomal protein L18/L5	IPR005484	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NZ46

Fln msg:

Fln protein: MFKRLLRDIWNKGENKLSRNHLDVFSVLAREFHSGKELCGPRSFFGVEDFVDDDNTKPYTYRKEKISKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAVGRILADRSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN*

Protein Length: 188

Fln nts: GGATAAGGAGAATTCGCTAAGGCGTGGAAAAAGCATTGTAAAAGCCTAAGAATGTAGAAGAGTGTGGATTTGCTCTGTATTCTCAAAATCAAGGAAAATGGCAAATTGTTAGCGGCTATTCAGTCGAATTCGTCATTATGGGAGTTATTGGAACTTAGACCTAGAGGCAATCAGAAAATTGGAATGCATAATCGATACTAGGGGTTTTTCATTCTAGTCCTGCTATCCGACCACCACCTCTCGTCTCGGCCTGGATTTTTCTTCCATAGATGGGCTGAGCAAAGGGGTCTCGTCTTCATTTATTCAATTTGGATTTGGCAGAAGGGCTCAATGTATCAAGTGGGAGGAGGTTTGGATCGTCACTGGCCGTGTCAGGGCTAGTAGAGGGTCCAATATTTCAAAGGTGTGTCTACAATGATATGTTGAGGCTCAGAGCATAGGAGAAAAACGATTCTGTCGTCAAGGTTTACCAGAGTGCAAA_-_ATGTTCAAGCGGTTACTCAGAGATATATGGAATAAAGGGGAGAATAAATTAAGCAGAAATCATTTAGATGTCTTTTCTGTCCTTGCAAGAGAGTTCCACAGTGGAAAGGAATTATGTGGACCTAGAAGCTTTTTTGGCGTGGAGGATTTTGTAGATGATGACAACACTAAACCATACACATATAGGAAGGAGAAAATATCAAAAAACCCACATAAGCATGTATCTTTCAAGCAACGAACAATTGCCTATATGCAGCCCTTTACACTGGATGTCTTCATATCAAAGCGCTTTGTTAGTGCATCAATTACCCACAGGGTCACGAGCAAGCAGGTGGCAGTTGCAGGTACAAATTCTAAAGACATAAAAGCTGCATTGAGGTCTAAGTCAGATATTCCTGCTTGTTTGGCAGTTGGTCGAATCTTAGCTGATCGATCAAGAGAGGCAGATGTATACACTGCGGTATATACTCCCAGAGAAAGGGACAAATTTGAAGGAAAAATAAGAGCTGTGGTCCAATCTCTCATAGATAATGGTATTGATATCAAAGTATATTTAAATTAA___CTTAGGAATATCCATATCGCTACATCTCAATTTAAGGCCCTGCTCAGCATCTTCTACTGATTATGTGTGCACCTGTTTATGTGTGAATATTTCAGGAGTTCTGTAAAAAACGTTGAGAGCCATACGTGTGACAATTGTTATATCTTTGTGCCTATATTTTAAATTAGGGGTGTTGTAAGCCATTATTTTATAATTTATTGCCTAGCTGGAACATTTATTGAAAGCTATGCATTTAAAGTTTAAACAATGTGCTACTATTCACATTCACGAGGCAAATTGTTTTCATTTGCCCGTTATGGTTTGATAGAGGCAGTGCATCACAGGTAAATGATCCTTTTGCTACTTCCGGAAATTTTTGTTTTCTTTTTAGTTGTGCAATAAAGCGAGGACGAAATCAGTTTTCTAGTGGATCTAAA

Fln Alignment:

uma_euler_12411___MFKRLLRDIWNKGENKLSRNHLDVFSVLAREFHSGKELCGPRSFFGVEDFVDDDNTKPYTYRKEKISKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAVGRILADRSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN
A9NZ46_______________MFKLLLRDIWNKGEHTLSRSHLDVFSVLAREIHSGKELCGPRSFFGVEDFVDDDNSKPYTYMKEKKSKNPHKHVSFKQRTIAYMQPFTLDVFISKRFVSASITHRVTSKQVAVAGTNSKDIKAALRSKSDIPACLAIGRILAERSREADVYTAVYTPRERDKFEGKIRAVVQSLIDNGIDIKVYLN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain