SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91554

Length: 520 nt

UniGene Fasta

>sp_v2.0_unigene91554
GTATGGAATTGTACAGTACTCTGACCAGATGATGAATATCTTCTTGAGAATATTTTCTTGTAGGAGCGCCATGGTTCACGAGGAAGCAATGTTAGCCATTGGGGCACTTGCTTATGCAATTGGCGTGGAATTTGGCAAGTATATGCAAGAATTCTATAGATATTTGGAAATGGGTCTTCAGAACTTCGAAGAATATCAGGTTTGTGCTATCACTGTTGGGGTGGTTGGTGATATCTGTCGAGTACTGGATGACAAGATGCTGCCTTTCTGTGATGGCATCATGTCACAGCTTCTCAAGGACCTTTCAAGCAATCAGCTCCATCGTTCAGTAAAACCCAGAATATTTTCTTGTTTTGGAGATATAGCTTTGGCTATTGGCGAGCATTTTGAGAAATATTTGATTTATGCAATGCCCATGCTTCAGAGTGCAGCAGAGATCTCAGTGCAGCCTGCAAGCCAAGAGGTTGAAATATCAGAGTACACTAATCAGCTACGCAATGGAATCATAGAAGCCTATTCA

Ace file of the UniGene sp_v2.0_unigene91554

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Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj\|BAB09724.1\| importin beta [Arabidopsis thaliana] gb\|AED96362.1\| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana]	-	-	76%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	76%
Blast2go	protein	-	-	89%

Source	InterPros	Term	Type	Identity
Sma3	HEAT	IPR000357	-	-
Sma3	Importin-beta, N-terminal	IPR001494	-	-
Sma3	Armadillo-like helical	IPR011989	-	-
Sma3	Peptidase S1/S6, chymotrypsin/Hap, active site	IPR018114	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: C0PQV8

Fln msg: Distance to subject end: 99 aas, your sequence is shorter than subject: 173 - 874

Fln protein: YGIVQYSDQMMNIFLRIFSCRSAMVHEEAMLAIGALAYAIGVEFGKYMQEFYRYLEMGLQNFEEYQVCAITVGVVGDICRVLDDKMLPFCDGIMSQLLKDLSSNQLHRSVKPRIFSCFGDIALAIGEHFEKYLIYAMPMLQSAAEISVQPASQEVEISEYTNQLRNGIIEAYS

Protein Length: 174

Fln nts: GTATGGAATTGTACAGTACTCTGACCAGATGATGAATATCTTCTTGAGAATATTTTCTTGTAGGAGCGCCATGGTTCACGAGGAAGCAATGTTAGCCATTGGGGCACTTGCTTATGCAATTGGCGTGGAATTTGGCAAGTATATGCAAGAATTCTATAGATATTTGGAAATGGGTCTTCAGAACTTCGAAGAATATCAGGTTTGTGCTATCACTGTTGGGGTGGTTGGTGATATCTGTCGAGTACTGGATGACAAGATGCTGCCTTTCTGTGATGGCATCATGTCACAGCTTCTCAAGGACCTTTCAAGCAATCAGCTCCATCGTTCAGTAAAACCCAGAATATTTTCTTGTTTTGGAGATATAGCTTTGGCTATTGGCGAGCATTTTGAGAAATATTTGATTTATGCAATGCCCATGCTTCAGAGTGCAGCAGAGATCTCAGTGCAGCCTGCAAGCCAAGAGGTTGAAATATCAGAGTACACTAATCAGCTACGCAATGGAATCATAGAAGCCTATTCA

Fln Alignment:

uma_euler_10696___YGIVQYSDQMMNIFLRIFSCRSAMVHEEAMLAIGALAYAIGVEFGKYMQEFYRYLEMGLQNFEEYQVCAITVGVVGDICRVLDDKMLPFCDGIMSQLLKDLSSNQLHRSVKPRIFSCFGDIALAIGEHFEKYLIYAMPMLQSAAEISVQPASQEVEISEYTNQLRNGIIEAYS
C0PQV8_______________YAILQYADQMMALFLQVFACRSATVHEEAMLAIGALAYATGAEFAKYMPEFYKYVEMGLQNFEEYQVCAVTVGVVGDICRALEAKIFPFCDGIMTHLLKDLSSSQLHRSVKPPIFSCFGDIALAIDGNFEKYLAYAMPMLQSAAEIAAQSVSTDDEMVEYNNQLRNGIFEAYS

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain