SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene91274

Length: 418 nt

UniGene Fasta

>sp_v2.0_unigene91274
GTTCCTGTCAGTTACAGGCAGGCAATACGCGACGTCCTTTTACCGGATGGGACCAATGTCAAGAAGGGCTCAAAGCTTCTGTATTTTATTTATGCCACGAGTAGGATGGAGAGCGTGTGGGGTAAGGATTGCAGGGAATTCAAGCCCGAGAGATGGATTGGCCGAGATGGATTTTGCATAAAGGAATCAGACTATAAGTACCCCGTCTTCAATGCCGGGCCTCGGCTGTGCCTGGGAAAGGAGATGGCTTATGTTAACATGAAGTGTGTGGCCGCTCATGTTCTTCTGCGTTACCGCGTGAGAATCGATCCCGGGCATCCCGTGAAGCCCAAGTTCGGGCTGACTATCTTCATCCAACATGGCCTCAAGGTAACGTTACAGCCCAGAGAGGATCGGCTGACATAACACCACGAGAATG

Ace file of the UniGene sp_v2.0_unigene91274

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	cytochrome P450 86B1 [Arabidopsis thaliana] gb\|AAM97029.1\| cytochrome P450-like protein [Arabidopsis thaliana] gb\|AAN15497.1\| cytochrome P450-like protein [Arabidopsis thaliana] dbj\|BAE99010.1\| cytochrome P450 like protein [Arabidopsis thaliana] gb\|AED912	-	-	1.0e-38	55%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	82%
Blast2go	cytochrome p450 86b1-like	-	-	0.0	76%

Source	InterPros	Term	Type	Identity
Sma3	RNA helicase, ATP-dependent, DEAD-box, conserved site	IPR000629	-	-
Sma3	Cytochrome P450	IPR001128	-	-
Sma3	Lipocalin	IPR002345	-	-
Sma3	Cytochrome P450, B-class	IPR002397	-	-
Sma3	Cytochrome P450, E-class, group I	IPR002401	-	-
Sma3	Cytochrome P450, E-class, group IV	IPR002403	-	-
Sma3	EGF-like region, conserved site	IPR013032	-	-
Sma3	Cytochrome P450, conserved site	IPR017972	-	-
Sma3		IPR017973	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NWX3

Fln msg: your sequence is shorter than subject: 135 - 519

Fln protein: VPVSYRQAIRDVLLPDGTNVKKGSKLLYFIYATSRMESVWGKDCREFKPERWIGRDGFCIKESDYKYPVFNAGPRLCLGKEMAYVNMKCVAAHVLLRYRVRIDPGHPVKPKFGLTIFIQHGLKVTLQPREDRLT*

Protein Length: 136

Fln nts: GTTCCTGTCAGTTACAGGCAGGCAATACGCGACGTCCTTTTACCGGATGGGACCAATGTCAAGAAGGGCTCAAAGCTTCTGTATTTTATTTATGCCACGAGTAGGATGGAGAGCGTGTGGGGTAAGGATTGCAGGGAATTCAAGCCCGAGAGATGGATTGGCCGAGATGGATTTTGCATAAAGGAATCAGACTATAAGTACCCCGTCTTCAATGCCGGGCCTCGGCTGTGCCTGGGAAAGGAGATGGCTTATGTTAACATGAAGTGTGTGGCCGCTCATGTTCTTCTGCGTTACCGCGTGAGAATCGATCCCGGGCATCCCGTGAAGCCCAAGTTCGGGCTGACTATCTTCATCCAACATGGCCTCAAGGTAACGTTACAGCCCAGAGAGGATCGGCTGACATAA___CACCACGAGAATG

Fln Alignment:

uma_euler_5643___VPVSYRQAIRDVLLPDGTNVKKGSKLLYFIYATSRMESVWGKDCREFKPERWIGRDGFCIKESDYKYPVFNAGPRLCLGKEMAYVNMKCVAAHVLLRYRVRIDPGHPVKPKFGLTIFIQHGLKVTLQPRED
A9NWX3_______________VPVSYRQAVRDVILPDGTRVKKGSKLLYLIYATNRMENLWGKECREFRPERWINRNGICMKESDYKYPVFNAGPRLCLGREMAYVSMKCLAAHVLLRYRVRIYPGHPVQPKFGLTLFMRHGLKVTLQPRDN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain