SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene86451

Length: 857 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene86451

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Respiratory burst oxidase homolog protein A n=4 Tax=Solanaceae RepID=RBOHA_SOLTU	-	-	67%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	58%
Blast2go	nad h oxidase	-	-	77%

Source	InterPros	Term	Type	Identity
Sma3	Cytochrome b245, heavy chain	IPR000778	-	-
Sma3	Calcium-binding EF-hand	IPR002048	-	-
Sma3	EF-hand-like domain	IPR011992	-	-
Sma3	FAD-binding 8	IPR013112	-	-
Sma3	Ferric reductase, NAD binding	IPR013121	-	-
Sma3	Flavoprotein transmembrane component	IPR013130	-	-
Sma3	NADPH oxidase Respiratory burst	IPR013623	-	-
Sma3	Ferredoxin reductase-type FAD-binding domain	IPR017927	-	-
Sma3	EF-Hand 1, calcium-binding site	IPR018247	-	-
Sma3	EF-hand	IPR018248	-	-
Sma3	EF-HAND 2	IPR018249	-	-
Sma3	Chaperonin Cpn60, conserved site	IPR018370	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5ABF5

Fln msg: your sequence is shorter than subject: 275 - 358

Fln protein: VFAAADASEPPAISKTQAETTEKSLLPPAISKTQAETTERSVGKSLPRLFVDGPYGAPAQDYAKYDVLLLVGLGIGATPFISILKDLLMNIKLIEDNRMESNSDSSKSFTESPSKGKHDYPITSPKKKKKSMQTTNAYFYWVTREQGSFDWFKGVMNEVAEMDQKRVIEMHNHLTSVYEEGDARSTLITMVQALNHAKNGVDIVSGTRVRTHFARPNWRKVFSRISSKHPYATVGVFYCGAPSLAQELSKLSQEYSHDTSKATATRFEFHKEHF*

Protein Length: 276

Fln nts: TGTTTTTGCTGCAGCTGATGCAAGTGAGCCTCCTGCAATTAGCAAGACACAGGCCGAGACAACTGAGAAGAGCCTCTTGCCTCCTGCCATTAGTAAGACACAGGCCGAGACAACTGAGAGGAGCGTAGGCAAAAGTCTGCCAAGGCTCTTCGTCGATGGGCCCTATGGAGCTCCAGCACAGGATTACGCAAAATATGATGTACTACTCCTTGTTGGTCTCGGTATTGGAGCTACCCCTTTCATTAGCATATTGAAGGATTTGCTCATGAACATCAAGCTGATAGAAGATAACAGGATGGAATCCAATTCTGATAGCAGTAAGTCCTTCACTGAGAGCCCGAGCAAAGGCAAGCATGATTATCCCATAACAAGTCCCAAGAAGAAGAAGAAGTCCATGCAAACCACCAATGCATATTTCTATTGGGTTACAAGAGAGCAAGGCTCATTCGACTGGTTCAAGGGAGTCATGAACGAAGTGGCTGAGATGGATCAAAAGAGGGTCATAGAAATGCATAATCATTTGACGAGCGTTTATGAGGAAGGAGATGCTCGATCTACCTTGATCACCATGGTACAGGCCTTGAATCACGCTAAGAATGGGGTAGACATTGTGTCTGGAACAAGGGTTCGAACCCATTTTGCAAGGCCAAATTGGAGGAAGGTTTTCTCAAGGATTTCTTCAAAGCATCCTTACGCCACCGTGGGTGTATTTTACTGTGGAGCCCCTTCATTGGCGCAGGAATTGAGCAAGCTCTCGCAGGAGTACAGTCACGATACATCCAAAGCCACTGCCACTAGATTCGAGTTTCACAAAGAGCACTTCTAA___ATGACTACTCTTCTACTTTTTAAATCATTTT

Fln Alignment:

mc_euler_6098___PPAISKTQAETTERSVGKS---LPRLFVDGPYGAPAQDYAKYDVLLLVGLGIGATPFISILKDLLMNIKLIEDNRMESNSDSSKSFTESPSKGKHDYPITSPKKKKKSMQTTNAYFYWVTREQGSFDWFKGVMNEVAEMDQKRVIEMHNHLTSVYEEGDARSTLITMVQALNHAKNGVDIVSGTRVRTHFARPNWRKVFSRISSKHPYATVGVFYCGAPSLAQELSKLSQEYSHDTSKATATRFEFHKEHF
D5ABF5_______________PPMGGKSGLLRADYMQGKNNPRFPRLLIDGPYGAPAQDYKKYDVLLLVGLGIGATPFISILKDIVNHMKVSEEERNIENVG---------------------KQKKKTFNTVRAFFYWVTREEGSFDWFKGVMNEVAEIDQKGIIELHNYCTSVYEEGDARSALIAMLQALNHAKHGVDIVSGTRVCTHFAKPNWRNVFKSITLKHKDSRVGVFYCGPAALTDDLRQLSLDFTRKTS----TRFDFHKENF

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain