SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene86313

Length: 259 nt

UniGene Fasta

>sp_v2.0_unigene86313
CAAATCTTCGGATACTCTCTACGAGGCTGCAAGTGAAGGGCGCAAAGAGAGCGTTGATTTCATATACCTAACGCATTTAACAAACCTGCTGTCGGTTTTTCATTTGCGTTTCGGTTTTGCCTCATTTGCGGCAAAGCCATACTCTTCCAAATGGTATATAAGGATGTTGTGGCCTATATTGTTCATTAAATCGAACCATAAATGGTACCCAAACAGAACACCAATGGAATTAGTATTGGTGATAGCTAGAGGTAGTTCA

Ace file of the UniGene sp_v2.0_unigene86313

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Unassigned protein	-	-	0.0	-
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	31%
Blast2go	protein wax2-like	-	-	1.77389e-20	72%

Source	GOs	Term	Type	e value	Identity
Blast2go	wax biosynthetic process	GO:0010025	Biological Process	1.77389e-20	72%
Blast2go	cutin biosynthetic process	GO:0010143	Biological Process	1.77389e-20	72%
Blast2go	anther development	GO:0048653	Biological Process	1.77389e-20	72%
Blast2go	exine	GO:0043668	Cellular Component	1.77389e-20	72%
Blast2go	endoplasmic reticulum	GO:0005783	Cellular Component	1.77389e-20	72%

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: D5A835

Fln msg: Distance to subject end: 263 aas, your sequence is shorter than subject: 86 - 623

Fln protein: KSSDTLYEAASEGRKESVDFIYLTHLTNLLSVFHLRFGFASFAAKPYSSKWYIRMLWPILFIKSNHKWYPNRTPMELVLVIARGSS

Protein Length: 87

Fln nts: CAAATCTTCGGATACTCTCTACGAGGCTGCAAGTGAAGGGCGCAAAGAGAGCGTTGATTTCATATACCTAACGCATTTAACAAACCTGCTGTCGGTTTTTCATTTGCGTTTCGGTTTTGCCTCATTTGCGGCAAAGCCATACTCTTCCAAATGGTATATAAGGATGTTGTGGCCTATATTGTTCATTAAATCGAACCATAAATGGTACCCAAACAGAACACCAATGGAATTAGTATTGGTGATAGCTAGAGGTAGTTCA

Fln Alignment:

mc_euler_1988___LYEAASEGRKESV-DFIYLTHLTNLLSVFHLRFGFASFAAKPYSSKWYIRMLWPILFIKSNHKW
D5A835_______________LHRSMSAGQVEDVPDYVFLAHIVDVLSSLHVRFLLRGFCSTPFATWWFLLPLWPVVIPVALAMW

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain