SustainPineDB

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Assembly info
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Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene86228

Length: 220 nt

UniGene Fasta

>sp_v2.0_unigene86228
GGTACCCTGGGTATCGCCTGGTCCTTCGGCGGAATGATCTTTGTCCTCGTGTATTGCACCGCTGGAATTTCAGGTGGGCATCTAAACCGTCACGTTCGGGCTGTTTGTTGCTCGGAAAGTGACTCTGAATCGAGCAGTCTTGTACATGGTGGCACAGTGGCAATCTGCGGGGCAGGGATGGTGAAAGCGTTGCAGAAAACTTACTATTCTAGTGGCGGGG

Ace file of the UniGene sp_v2.0_unigene86228

If you push the Download ace button, you will download an ace file of this UniGene.

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Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	Probable aquaporin n=2 Tax=Picea RepID=Q3ZDL5_PICAB	-	-	4.0e-16	60%
FL-Next	tr=Probable aquaporin; Picea abies (Norway spruce) (Picea excelsa).	-	-	0.0	60%
Blast2go	aquaporin pip2 1	-	-	4.66985e-20	61%

Source	InterPros	Term	Type	e value	Identity
Sma3	Major intrinsic protein	IPR000425	-	0.0	-
Sma3	Aquaporin	IPR012269	-	0.0	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: coniferopsida.fasta

Fln subject: Q3ZDL5

Fln msg: Distance to subject end: 137 aas, your sequence is shorter than subject: 73 - 280

Fln protein: GTLGIAWSFGGMIFVLVYCTAGISGGHLNRHVRAVCCSESDSESSSLVHGGTVAICGAGMVKALQKTYYSSGG

Protein Length: 74

Fln nts: GGTACCCTGGGTATCGCCTGGTCCTTCGGCGGAATGATCTTTGTCCTCGTGTATTGCACCGCTGGAATTTCAGGTGGGCATCTAAACCGTCACGTTCGGGCTGTTTGTTGCTCGGAAAGTGACTCTGAATCGAGCAGTCTTGTACATGGTGGCACAGTGGCAATCTGCGGGGCAGGGATGGTGAAAGCGTTGCAGAAAACTTACTATTCTAGTGGCGGGG

Fln Alignment:

mc_euler_383___GTLGIAWSFGGMIFVLVYCTAGISGGHLNRHV-------RAVCCXXXXXXXXXLVHGGTVAICGAGMVKALQKTYYSSGG
Q3ZDL5_______________GTLGIAWSFGGMIFVLVYCTAGVSGGHINPAVTFGLFIARKVSLNRAVFYIVAQCLG---AVCGAGMVKALQKNYYSAGG

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain