SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85999

Length: 1133 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene85999

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	zinc ion binding	-	-	38%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	41%
Blast2go	uncharacterized protein	-	-	58%

Source	InterPros	Term	Type	Identity
Sma3	Zinc finger, RING-type	IPR001841	-	-
Sma3	Zinc finger, C2H2	IPR007087	-	-
Sma3	Protein of unknown function DUF1644	IPR012866	-	-
Sma3	Zinc finger, C2H2-like	IPR015880	-	-

Full-Lengther Next Prediction

Fln status: N-terminus

Fln database: coniferopsida.fasta

Fln subject: D5A9B7

Fln msg: Distance to subject end: 76 aas,

Fln protein: MPKDLEQSNNLVSRKARCSRYHPYNEQHLISGGNSLQDEEINAQKKEWDNTVCLICMEHPHNAVLLLCSSSDKGCCPYMCDTSYRHSNCLDRYRKPLANFHNHSSQSIEVYINDAGSGVRSLTNMAEYPGIGGPGNTREILAGSWTSRSEGSEDSQNRRASHMLSELQPGRIRDVPVRDEGETSDSVNTRQLGNENEAHLNGEVELKCPLCRGTVNGYKVVEAARQYLNMKMRNCSHESCSFSGTYEELRKHARSVHPTARPAEVDPSRQRAWRHLERQRDFGDVLSTIRSAMPSAIVLGDYVIDSEDGVHFDQGDENENFTSSRSWWTTFFLT

Protein Length: 335

Fln nts: GCATAATTAAAAGTCCATCGTTCATCTTATCAATATAAATACTTCAGCCTTGGTTAGGCAGTAAGATACAGGAAGCAATACAAGCAGGGAAGGCTTCATTTCAGAACCCAAATCAGCTAATAGATAAAG_-_ATGCCAAAGGATCTTGAGCAGTCCAATAACTTGGTTTCACGCAAGGCTAGGTGTTCCAGATATCATCCTTACAATGAGCAGCATCTTATCTCTGGAGGAAACTCATTGCAAGATGAAGAAATCAATGCTCAGAAGAAAGAGTGGGATAATACAGTGTGCCTAATTTGTATGGAGCATCCACATAATGCTGTGCTTCTCTTGTGTAGTTCTTCTGACAAGGGTTGCTGTCCTTACATGTGTGATACAAGTTATCGGCATTCAAATTGCCTTGATCGGTATAGAAAGCCCCTGGCAAATTTCCATAACCATTCATCTCAGAGTATTGAAGTTTATATCAATGATGCCGGAAGTGGTGTAAGATCATTGACAAACATGGCTGAATACCCTGGAATAGGAGGGCCAGGAAATACCAGAGAAATTCTTGCTGGGTCTTGGACCTCGAGGTCAGAAGGATCTGAAGATTCACAAAATAGGAGGGCTTCACATATGTTGTCAGAATTACAGCCAGGCAGGATAAGAGATGTACCAGTAAGAGATGAAGGAGAAACATCAGATTCTGTTAACACACGGCAACTTGGGAATGAAAATGAAGCACACTTGAATGGTGAAGTTGAGCTGAAATGCCCTCTCTGTAGAGGCACAGTGAATGGGTACAAGGTTGTAGAAGCTGCAAGACAATATCTGAACATGAAGATGAGAAATTGTTCCCACGAGTCATGCTCTTTTAGTGGAACTTATGAAGAACTCCGCAAACATGCAAGAAGCGTTCATCCAACAGCTAGACCAGCAGAAGTTGATCCTTCCCGTCAACGTGCTTGGCGGCATTTAGAACGTCAACGCGATTTTGGGGATGTGCTCAGTACCATACGTTCAGCCATGCCGAGTGCAATTGTGCTTGGGGATTATGTTATTGATAGTGAAGATGGAGTTCATTTTGACCAAGGTGATGAGAATGAAAATTTCACATCTTCTCGAAGTTGGTGGACAACATTCTTTTTGACATT

Fln Alignment:

biogeco3_euler_12456___MEHPHNAVLLLCSSSDKGCCPYMCDTSYRHSNCLDRYRKPLA-----NFHNHSSQSIEVYINDAGSGVRSLTNMAEYPGIGGPGNTREILAGSWTSRSEGSEDSQNRRASHMLSELQPGRIRDVPVRDEGETSDSVNTRQLGNENEAHLNGEVELK---CPLCRGTVNGYKVVEAARQYLNMKMRNCSHESCSFSGTYEELRKHARSVHPTARPAEVDPSRQRAWRHLERQRDFGDVLSTIRSAMPSAIVLGDYVIDSEDGVHFDQGDENENFTSSRSWWTTFFL
D5A9B7_______________MHSPHNAVLLLCSSHEKGCHAYMCDTSYRHSNCLDQFRKAYSASTTSTSSNGSDHSVEISAHSSSEPIAS----------------SRLVVDRLESHDVVLEVGTSQHSTSVISDGQ----------------NELSTEGPGPDTELLLHGSCELPGLVCPLCRGKVKGWTVVHSVRKYLNAKARSCAQESCSFVGTYAELRKHARCVHPHARPSELDPDQQRKWRRLEQQQDIGDVLSNIRSEIPGAMVFGDYVI---EGDSIENEDDGVDFPGEENNWLTVFL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain