SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85968

Length: 1331 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene85968

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	TLD-domain containing nucleolar protein [Arabidopsis thaliana] ref\|NP_001190974.1\| TLD-domain containing nucleolar protein [Arabidopsis thaliana] gb\|AAN86157.1\| unknown protein [Arabidopsis thaliana] gb\|AEE87131.1\| TLD-domain containing nucleolar protein	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	tld-domain containing nucleolar protein	-	-	76%

Source	InterPros	Term	Type	e value	Identity
Sma3	TLDc	IPR006571	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LR06

Fln msg:

Fln protein: MMIEWEESLINRFISGFPNIIFQAGGPDTTSFMSFLYSFLSCSEASIRRAEDSEGKDECNIEMNEQYSTKGTRIAGSRKRQSTKSKSSSGKKHYQGRSSPQSSNQEDANGAGNGDEGDQHVVTDHDIKSEKDFHKSVQQDMLMEMSEPSLLLSRHFGNYLCSELPTLAQGRKWVLLYSTWKHGISLQTLYRRSTLNPGPCLLVVGDRRGAVFGGLVAGPLRPTSSKKYQGTNDAFVFTNVSGTPVLFRPTGVNRYFTLCSADSLALGGGGHFALYLDGDLLHGSSSSSETFGNSCLAHTEDFELKEVELWGFVYASKYPSRVASYSEPQEAPGICRWLD*

Protein Length: 341

Fln nts: AATGTCAACAATGTGTATCCATATTCGTAGTATATTCAAAGCTTTGTTTCGTTTCGTCAAATATGGTGAAAATGAAGAGTCGGAAAGTTCGTAGAGTGCCGTCGAGTAACATATGAATATTGCAGGTTTTGGCATGGTTGTTGTTG_-_ATGATGATTGAGTGGGAAGAATCGTTGATTAACAGGTTTATATCAGGGTTTCCGAATATTATTTTCCAGGCTGGTGGGCCGGACACTACTTCTTTTATGTCCTTCCTCTACTCTTTTCTGTCATGTTCAGAAGCAAGTATTAGGCGTGCAGAAGACAGTGAAGGGAAGGATGAATGCAATATTGAAATGAATGAACAGTACTCAACTAAAGGGACAAGAATTGCTGGCAGCAGGAAACGACAGAGTACCAAGTCTAAGAGTTCCTCCGGCAAAAAACATTATCAAGGGAGGAGCTCTCCCCAAAGTTCTAACCAGGAAGATGCTAACGGTGCAGGTAATGGTGATGAAGGTGACCAGCATGTTGTTACAGACCATGATATAAAGTCAGAAAAAGATTTTCACAAATCTGTTCAACAAGACATGCTTATGGAAATGTCTGAGCCTTCCTTGCTTCTTTCAAGGCATTTTGGCAATTATTTGTGTTCTGAACTACCAACATTGGCACAAGGAAGGAAATGGGTGCTCCTTTATAGCACATGGAAGCATGGAATATCACTTCAGACTCTCTACCGGAGAAGTACATTAAATCCTGGTCCATGTCTGCTGGTAGTTGGAGACCGTAGGGGCGCTGTTTTTGGTGGCTTAGTGGCAGGACCTTTAAGACCAACCAGCAGCAAGAAGTATCAGGGAACAAATGATGCTTTTGTTTTCACAAATGTTTCTGGCACACCTGTCCTGTTTCGTCCAACAGGTGTAAATCGCTATTTTACATTATGTTCTGCTGATTCACTAGCTCTCGGTGGGGGTGGGCATTTTGCTCTTTACTTGGATGGAGATCTGTTGCATGGATCAAGTTCTTCCTCTGAGACATTTGGCAATTCATGCTTAGCTCACACAGAGGATTTTGAGTTGAAGGAGGTCGAGCTTTGGGGTTTTGTATATGCATCAAAATACCCATCAAGAGTAGCTTCATACAGTGAACCACAGGAAGCTCCAGGAATCTGCAGATGGTTGGATTAA___GCTTTGGAATCTTATAACTTCTGGGCTGTGCTATAGTCTTTACACACTCATGTACATATTTGCATGTTCATTTAAGCAGTCTGAACCTTGTTAATAAAAATACCATATAGGACTTAATTTGTGGGTCATACTGCCAACGTTTGATATTGTGCTATACTAGTGACC

Fln Alignment:

biogeco3_euler_11350___QAGGPDTTSFMSFLYSFLSCSEASIRRAEDSEGKDECNIEMNEQYSTKGTRIAXXXXXXXXXXXXXXXXXHYQGRSSPQSSNQXXXXXXXXXXXXXQHVVTDHDIKSEKDFHKSVQQDXXXXXXXXXXXXXRHFGNYLCSELPTLAQGRKWVLLYSTWKHGISLQTLYRRSTLNPGPCLLVVGDRRGAVFGGLVAGPLRPTSSKKYQGTNDAFVFTNVSGTPVLFRPTGVNRYFTLCSADSLALGGGGHFALYLDGDLLHGXXXXXETFGNSCLAHTEDFELKEVELWGFVYASKYPSRVASYSEPQEAPGICRWLD
B8LR06_______________QAGGPDTTSFMSFLYSFLSCSEASVRRAEDGE-KDECNIEMNEQYSTKGS--VGSRKRQSAKSKCSSGKKHYQGRNSPQSSNQEDAHGAGNGDEGDWHFLTDHDIKSEKGSHKSIQQDMLLEMSEPSLLLSKHFSSYLCSELPTLAQGRKWVLLYSTWKHGISLHTLYRRSTLSPGPCLLVVGDRRGAVFGGLLTGPLRPTSSKKYEGTNDTFVFTNVSGTPVLFRPTGVNRYFTLCSADSLALGGGGHFALYLEGDLLHGSSSSSQTFGNSCLAHTEDFELKDVELWGFVYASKYPSKEASYSEPQEAPGICRWLD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain