SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85903

Length: 1163 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene85903 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Pollen allergen CJP38 n=1 Tax=Cryptomeria japonica RepID=Q588B8_CRYJA	-	-	65%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	74%
Blast2go	beta- -glucanase	-	-	69%

Source	InterPros	Term	Type	Identity
Sma3	Peptidase, cysteine peptidase active site	IPR000169	-	-
Sma3	GPCR, rhodopsin-like, 7TM	IPR000276	-	-
Sma3	Glycoside hydrolase, family 17	IPR000490	-	-
Sma3	Peptidase M14, carboxypeptidase A	IPR000834	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	X8	IPR012946	-	-
Sma3	Glycoside hydrolase, subgroup, catalytic domain	IPR013781	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NTI6

Fln msg:

Fln protein: MAASNEQTTIILLGFMMIFCFSIFADGVNIGVNYGMLGDNLPPGKQVVTLLNGHNIGKMKLFDPDGGALNAFANSGIDVIVGVNNNDLKAISSSQDSANGWVKDNIVPYSSTSIKYIAVGNEVLPNTQYVSYLFPAMTNIQTAIQNANLQKIKVSTPHAFNVIGNSYPPSKGAFADNVMNTMRSILKFLSDNEAPFMANVYPYFSYVGDSKNIHQDYALFQPTAAAVPDGDHSYRNLFDAMVDSIFSAMEVLGYPNVPIVVTESGWPSAGADAATVENAKAYNNNLIKHVLSNAGTPKKPRTNIETYIFALFNENQKTGPETERHFGLFNPDQSPVYPVNFSP*

Protein Length: 345

Fln nts: CGGGAAGTTGAACGTCCTAGGCGGAGAATTTCTCAAATCTCTCATTTGCTGTGAGAAAT_-_ATGGCAGCGTCTAATGAACAGACGACGATAATCCTGTTAGGGTTTATGATGATCTTCTGTTTTTCAATCTTTGCCGATGGTGTTAATATAGGAGTGAACTACGGCATGCTCGGGGACAATCTCCCACCTGGAAAACAGGTGGTCACGTTGCTGAACGGCCACAACATCGGGAAAATGAAGCTTTTCGATCCGGACGGTGGTGCATTGAATGCTTTTGCAAATTCTGGGATCGATGTAATCGTGGGAGTCAATAATAACGATTTGAAGGCCATCTCCTCCAGTCAGGACTCAGCAAATGGTTGGGTTAAAGACAATATTGTCCCCTATTCCAGCACCAGTATCAAATATATTGCGGTGGGCAACGAGGTTTTGCCTAACACGCAGTACGTGTCGTATCTTTTTCCTGCGATGACCAACATTCAAACGGCGATTCAGAACGCCAATCTGCAGAAAATCAAGGTCTCTACCCCACATGCCTTCAATGTTATAGGCAACAGTTACCCGCCTTCAAAAGGAGCATTCGCTGACAATGTGATGAATACCATGAGGTCTATACTCAAATTTCTGTCAGATAACGAGGCTCCCTTCATGGCCAATGTGTATCCATATTTCAGCTACGTCGGCGACAGCAAGAACATTCATCAGGACTATGCTCTCTTTCAGCCCACTGCTGCGGCGGTGCCAGACGGAGATCACAGCTACCGCAACTTGTTCGATGCGATGGTGGATTCTATTTTCTCCGCAATGGAAGTCTTGGGCTATCCCAACGTCCCCATCGTCGTTACTGAAAGCGGATGGCCTTCTGCTGGCGCGGATGCGGCCACAGTTGAGAATGCTAAGGCTTATAACAACAATCTCATCAAACATGTATTATCGAATGCAGGGACGCCCAAGAAGCCGCGAACGAACATCGAAACCTATATCTTCGCTCTTTTCAACGAGAACCAAAAGACGGGGCCTGAGACGGAGCGTCACTTTGGGCTTTTCAACCCTGATCAAAGCCCTGTATACCCTGTCAACTTTTCTCCATAA___TTGAGCCAAGTCGATGTCGACCAGGCTTAGTAGTGATATATAATTATAGGAGAATGCTACATAAATAATCAT

Fln Alignment:

biogeco3_euler_8973___MAASNEQTTIILLGFMMIFCFSIFADGVNIGVNYGMLGDNLPPGKQVVTLLNGHNIGKMKLFDPDGGALNAFANSGIDVIVGVNNNDLKAISSSQDSANGWVKDNIVP-YSSTSIKYIAVGNEVLPNTQYVSYLFPAMTNIQTAIQNANLQK-IKVSTPHAFNVIGNSYPPSKGAFADNVMNTMRSILKFLSDNEAPFMANVYPYFSYVGDSKNIHQDYALFQPTAAAVPDGDHSYRNLFDAMVDSIFSAMEVLGYPNVPIVVTESGWPSAGADAATVENAKAYNNNLIKHVLSNAGTPKKPRTNIETYIFALFNENQKTGPETERHFGLFNPDQSPVYPVNFSP
A9NTI6_______________MAASKEQTKIILIGFIAIFCCSIFTDGDKIGVNYGMLGDNLPPADQVVTLINNNNIGKTRIFAANRDALNAFANSGIDVIVGVGNEELEAISSSQDSANGWVNNNIVPFYPATNIKYIAVGNEVLPSTQYVSYLFPAMTNIQTAVQNANLQNNIKVSTTHVMGVT-NGFPPSQGVFGDDVKDTMNSILKFLSDNGAPYMANVYPYFSYTGSGGSITLDYALFKSTSTVVTDNGRSYTNLFDAMVDTVISAMENLGYPNVPIVITESGWPSAGADAATVENAQSYNNNLIQHILSNAGTPKRSGTSIETYIFALFNENTKTGDEIERHFGLFNADQSPAYSVNFSP

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain