SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85832

Length: 1028 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene85832

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	embryo sac development arrest 7 protein [Arabidopsis thaliana] emb\|CAB72169.1\| putative protein [Arabidopsis thaliana] gb\|AAL47467.1\| AT3g56990/F24I3_70 [Arabidopsis thaliana] gb\|AEE79596.1\| embryo sac development arrest 7 protein [Arabidopsis thaliana]	-	-	53%
FL-Next	tr=Putative uncharacterized protein; Vitis vinifera (Grape).	-	-	66%
Blast2go	nucleolar protein 10	-	-	71%

Source	GOs	Term	Type	e value	Identity
Blast2go	megagametogenesis	GO:0009561	Biological Process	0.0	71%
Blast2go	nucleolus	GO:0005730	Cellular Component	0.0	71%

Source	InterPros	Term	Type	Identity
Sma3	WD40 repeat	IPR001680	-	-
Sma3	NUC153	IPR012580	-	-
Sma3	WD40/YVTN repeat-like-containing domain	IPR015943	-	-
Sma3	WD40-repeat-containing domain	IPR017986	-	-
Sma3	Glycoside hydrolase, family 5, conserved site	IPR018087	-	-
Sma3		IPR019782	-	-

Full-Lengther Next Prediction

Fln status: Internal

Fln database: tr_plants

Fln subject: D7TIN5

Fln msg: Distance to subject end: 191 aas, your sequence is shorter than subject: 342 - 701

Fln protein: KYGSHHSLRIPRMGRDIVYDRWSCDLICAASSPDLYRINLECFDLREKASVGRIDVATHTGDTDQEVTAIRFEETESFQMAVGTSSGQVLIYDLRSSRPFRVKDHMYGSPILDIKWHSTLNASRPRMITADNRVVRIWDPETGEGMTSIEPAAGSINDVCVIRNSGLMFMALESTQIPSYFIPSLGPAPKWCSYLENLTEELEEGAQTTIYDDFKFVTKEDLERLNLTNLIGTNLLRAYMHGFFIDYRLYLKAKSMADPFAYEAYRQQRIQEKIEAGRAARITIKRKLPKVNQDLAARLLATENDEDWEASVKDHASKKKKKTGTGSELLKDERFAAMFNDI

Protein Length: 343

Fln nts: CTAAATATGGGAGTCACCACAGCCTTCGAATTCCAAGGATGGGAAGGGATATTGTCTATGATCGTTGGTCATGTGATTTGATTTGTGCTGCTTCTTCACCAGATTTATATCGCATCAACTTAGAATGTTTTGATTTGAGAGAAAAAGCTTCGGTAGGAAGAATTGATGTAGCTACACATACAGGAGATACTGATCAGGAGGTCACTGCGATACGATTCGAGGAAACTGAAAGCTTTCAGATGGCAGTTGGAACTAGTTCTGGACAGGTGCTAATATATGATCTGCGTTCTTCAAGGCCTTTTCGAGTTAAAGATCACATGTATGGTAGCCCCATTTTGGATATCAAGTGGCATTCAACTCTAAATGCTTCAAGGCCGAGAATGATCACTGCTGATAATCGGGTAGTCAGAATTTGGGATCCAGAGACGGGAGAAGGTATGACTAGTATTGAACCAGCAGCTGGAAGTATTAATGATGTTTGTGTAATTCGCAACAGTGGACTAATGTTCATGGCACTGGAGTCCACTCAAATTCCTTCCTATTTTATCCCTTCTTTGGGACCTGCTCCAAAGTGGTGTTCTTACCTTGAGAACTTGACGGAAGAGCTTGAGGAAGGGGCACAGACTACCATCTACGATGATTTCAAATTTGTCACAAAAGAAGACCTTGAACGCTTGAACTTGACAAATCTGATTGGCACCAACCTTTTAAGAGCCTATATGCATGGATTCTTCATAGATTATCGTCTTTACCTGAAGGCAAAATCCATGGCAGATCCATTTGCTTATGAAGCTTATAGGCAACAGCGCATACAAGAAAAGATTGAGGCTGGCCGTGCTGCTCGCATAACGATTAAGAGGAAGCTACCTAAAGTAAATCAGGACTTAGCTGCTCGTCTTTTGGCAACTGAGAATGATGAAGATTGGGAAGCTTCTGTTAAAGACCATGCATCAAAGAAAAAGAAAAAGACTGGAACTGGGAGTGAATTGTTGAAAGATGAGCGTTTTGCAGCAATGTTTAATGACATT

Fln Alignment:

biogeco3_euler_6191___KYGSHHSLRIPRMGRDIVYDRWSCDLICAASSPDLYRINLE-------------------------------------CFDLREKASVGRIDVATHTGDTDQEVTAIRFEETESFQMAVGTSSGQVLIYDLRSSRPFRVKDHMYGSPILDIKWHSTLNASRPRMITADNRVVRIWDPETGEGMTSIEPAAGSINDVCVIRNSGLMFMALESTQIPSYFIPSLGPAPKWCSYLENLTEELEEGAQTTIYDDFKFVTKEDLERXXXXXXXXXXXXRAYMHGFFIDYRLYLKAKSMADPFAYEAYRQQRIQEKIEAGRAARITIKRKLPKVNQDLAARLLATE--NDEDWEASVKDHAXXXXXXXXXXXELLKDERFAAMFND
D7TIN5_______________KYGSHYSLRIPRMGRDIAYDYWSCDLLCAASSPDLYRINLEQGRFLSSLNTQSPALNVVSRSNLHGLVACGGEDGAVECFDMRTRSSVGRINAVAAAGDVDQEVTALEFDGDAGFLMAVGSSSGKVLIYDLRSSCPIRIKDHMYGSPILDIKWHRTLNSERPKLITTDNHIVRIWDPETGDGMTSIEPT-GTINDICVFSDSGLMLLALDGSQIPSYFIPALGPAPKWCSYLENLTEELEEGAQTTIYDDFKFLTKEDLERLNLTNLIGTNLLRAYMHGFFIDYRLYKKAQSLADPFAYDNYIEQRKKEKLETERASRITIKRKLPKVNRVLAARILEDEEAENETKDADGDDIKKKSKKKKALSSDVFKDERFAAMFEN

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain