SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene85474

Length: 886 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene85474 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	aldehyde dehydrogenase [Vitis pseudoreticulata]	-	-	73%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	89%
Blast2go	aldehyde dehydrogenase	-	-	87%

Source	GOs	Term	Type	Identity
Blast2go	response to cadmium ion	GO:0046686	Biological Process	87%
Blast2go	ATP binding	GO:0005524	Molecular Function	87%
Blast2go	chloroplast	GO:0009507	Cellular Component	87%
Blast2go	mitochondrion	GO:0005739	Cellular Component	87%

Source	InterPros	Term	Type	Identity
Sma3	Aldehyde dehydrogenase domain	IPR015590	-	-
Sma3	Aldehyde dehydrogenase, conserved site	IPR016160	-	-
Sma3	Aldehyde dehydrogenase, N-terminal	IPR016162	-	-
Sma3	Aldehyde dehydrogenase, C-terminal	IPR016163	-	-

Full-Lengther Next Prediction

Fln status: C-terminus

Fln database: coniferopsida.fasta

Fln subject: A9NUF6

Fln msg: Overlapping hits, possible frame ERROR between 359 and 329, your sequence is shorter than subject: 260 - 544

Fln protein: FTGSTETGKAVLELASKSNLKRVTLELGGKSPFIVCEDADVDQAVELAHTALFFNQGQCCCAASRTYVHESIHDEFVEKAKARCLSRVVGDPFKKGVEQGPQIDQMQFxxxxxxxxxxxxSGAKLVTGGDQIGTKGFYIMPTIFSEVKDDMTIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAWL*

Protein Length: 261

Fln nts: CCTTCACAGGATCAACCGAAACTGGTAAAGCAGTACTAGAGTTAGCTTCTAAGAGCAACCTTAAGCGAGTGACATTGGAACTTGGAGGGAAGTCTCCATTTATCGTATGTGAAGATGCTGATGTTGACCAGGCTGTTGAGCTTGCACACACTGCTCTATTTTTCAACCAGGGTCAATGCTGCTGTGCTGCATCACGAACCTATGTACATGAGAGTATCCATGATGAATTTGTAGAAAAGGCAAAAGCACGGTGTTTAAGTCGTGTTGTTGGTGATCCCTTTAAAAAAGGTGTTGAACAAGGTCCTCAGATTGACCAGATGCAGTTTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxAGTGGTGCAAAACTTGTAACAGGGGGAGACCAAATTGGTACCAAGGGCTTCTATATTATGCCTACCATCTTCTCAGAAGTCAAGGATGACATGACCATAGCTACTGACGAAATATTTGGTCCAGTACAGTCAATTATAAAATTCAAAACTTTAGACGAAGTAATAAAGCGGGCGAATGCTACTCGTTATGGCTTGGCAGCGGGAGTGTTTACAAAGAATCTAGAGACCGCGAACTCTCTTACTCGGGCATTACGTGTCGGAACAGTTTGGGTTAACTGCTTTGACATTTTTGATGCTGGTATACCTTTTGGTGGCTATAAAATGAGTGGCACTGGAAGAGAGAAGGGTATCTACAGTCTCAATAACTACTTACAGGTTAAAGCTGTTGTCTCACCTTTGAAGAATCCAGCCTGGTTGTAGGCTGTTAGTTCCTACAAATGGTTCAATTGTGTGGGGAACATATTCAGTTCCTGATGGTCTTGTCAAGTCAGTCTAATTTGAATTTAGCTTTCTCTGTCAATAATT

Fln Alignment:

biogeco2_euler_4619___FTGSTETGKAVLELASKSNLKRVTLELGGKSPFIVCEDADVDQAVELAHTALFFNQGQCCCAASRTYVHESIHDEFVEKAKARCLSRVVGDPFKKGVEQGPQIDQMQFNxxxxxxxxxxESGAKLVTGGDQIGTKGFYIMPTIFSEVKDDMTIATDEIFGPVQSIIKFKTLDEVIKRANATRYGLAAGVFTKNLETANSLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLNNYLQVKAVVSPLKNPAWL
A9NUF6_______________FTGSTETGKAVLELASKSNLKPVTLELGGKSPFIVCEDADVDQAVELAHFALFFNQGQCCCAGSRTFVHESIHDEFVEKAKARCLSRVVGDPFRKGVEQGPQIDQEQFNxxxxxxxxxxESGAKLVTGGDQIGTKGFYIMPTIFSEVQDDMAIATDEIFGPVQSIIKFKTLDEVIKRANASRYGLAAGVFTQNIETANTLTRALRVGTVWVNCFDIFDAGIPFGGYKMSGTGREKGIYSLQNYLQVKAVVTPLKNPAWL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain