SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84966

Length: 1207 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene84966

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TJS4_PHYPA	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	87%
Blast2go	transcription factor ilr3	-	-	70%

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: C0PR61

Fln msg:

Fln protein: MMGSLQCNKWMSFLEDNLLEDVGQPANSFVWPGQAINVHPDCSDSKNDKEDREKLCPRKRAREESCDKHGLKACREKMRRDRLNDRFMELSILLEPGRPPKMDKSAILSDALSLVNQLREKAGELKDSNERLRQSNKELKTEKNELRDEKTRLKAEKERLDQQMKVMMTSPPGFMPHLAVAHAFSAQSQAGNNKTLPIPGFPGMAMWQWMPPAVVDTSQDHVLRPPVA*

Protein Length: 230

Fln nts: TTGTCACTATGCACGAGCTTGGGTTTTTAGTTCCAGTATTTGATTGATGCATTCAGATCGATGAATTGTCAGTCTGTGAATCCCGGAGATTGCTGGTTGTGGGTTCGATTCCGAACGTGTGCATAAGGAATTACAGACTTCTTTCAATTGGCTGTTACAATTGGGT_-_ATGATGGGATCGCTTCAGTGCAATAAGTGGATGTCCTTTTTGGAGGATAATTTGCTGGAGGACGTGGGCCAACCGGCAAATTCGTTCGTCTGGCCTGGTCAGGCCATCAATGTTCATCCAGATTGCAGTGATTCTAAAAATGATAAGGAGGATCGAGAAAAATTGTGCCCTAGAAAGAGGGCACGAGAAGAGTCATGTGATAAACATGGGCTAAAAGCTTGCCGAGAAAAGATGCGAAGGGACAGACTAAATGACAGGTTCATGGAGCTAAGTATCTTGTTGGAACCTGGGCGGCCTCCAAAAATGGATAAATCTGCAATATTAAGTGATGCTCTTTCTCTTGTGAATCAACTACGAGAAAAGGCAGGCGAGCTGAAAGACTCAAATGAACGACTTCGGCAATCCAATAAGGAATTGAAGACAGAGAAAAATGAGCTTCGTGATGAAAAGACAAGGTTGAAAGCAGAGAAGGAAAGATTGGATCAACAAATGAAGGTTATGATGACTTCACCTCCAGGGTTCATGCCGCATCTGGCTGTAGCGCATGCATTCTCAGCTCAAAGTCAAGCAGGAAATAACAAGACTCTACCTATTCCAGGTTTTCCTGGAATGGCAATGTGGCAATGGATGCCTCCAGCTGTGGTTGATACTTCCCAGGATCACGTGCTAAGGCCTCCTGTTGCTTGA___AGCAGGCTCTTATTTTATATTCCAAACTGGTGCTACTATTTCTTTGGCCTTAGAAATGACCTTAGTTTCTTTGGTATCCAAGTTTTAGATGCTAGGTGCCATTGCATCAGTTCAATATTCTAATTTTTTATATTGTGCCATAGAGATAATTGAGGATTAATTACAATTCATCCTGATGATGAAATGGATTCACTGCTGTATTATGATAAATTACACTGGAGCTTTGCAGAACAATTATTAATCCTTTGTTCATGATCATGACATGTCTTGAACTGGAGATCGCTCGAACAGTTACAGTTGGTATAAACAACTTGACATTTCGTTCAAAAATCAATTGTAAATTGTGATAATTAA

Fln Alignment:

biogeco1_euler_15179___MMGSLQCNKWMSFLEDNLLEDVGQPANSFVWPGQAINVHPDCS----DSKNDKEDREKLCPRKRAREESCDKHGLKACREKMRRDRLNDRFMELSILLEPGRPPKMDKSAILSDALSLVNQLREKAGELKDSNERLRQSNKELKTEKNELRDEKTRLKAEKERLDQQMKVMMTSPPGFMPHLAVAHAFSAQSQAGNNKTLPIPGFPGMAMWQWMPPAVVDTSQDHVLRPPVA
C0PR61_______________MMGSPQCNKWMSFLEDNLLEDVSQPANSFFWPAQPVNVQPDCSAIPSDSKNDKEDGEKMCPRKRPRDESCSKHGIKACREKMRRERLNDRFTELSILLEPGRPPKTDKSAILSDALSLVNQLREEAGKLKDSNEQLRQSIKELKTEKNELRDEKTRLKAEKERLDQQMKAMMTSPPGFMPHLAVSHAFSAQSQAANSKTLPIPGFPGMAMWQWMPPAAVDTSQDHALRPPVA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain