SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84913

Length: 1271 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene84913

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Glutathione peroxidase (Fragment) n=20 Tax=Picea sitchensis RepID=E5F5S9_PICSI	-	-	87%
FL-Next	sp=Glutathione peroxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	65%
Blast2go	glutathione peroxidase-like protein	-	-	96%

Source	InterPros	Term	Type	Identity
Sma3	C2 calcium-dependent membrane targeting	IPR000008	-	-
Sma3	PWWP	IPR000313	-	-
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Glutathione peroxidase	IPR000889	-	-
Sma3	Leucine-rich repeat	IPR001611	-	-
Sma3	RNA polymerase II, large subunit, CTD	IPR006569	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3		IPR012335	-	-
Sma3	Phosphoribosyltransferase C-terminal	IPR013583	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-
Sma3	C2 membrane targeting protein	IPR018029	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NQB1

Fln msg: Separated hits, possible frame ERROR between 212 and 349,

Fln protein: MRPSVPSNLSRSFSVVPVLQAFLYKPFTPSVIPRAFHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIFRLRFSANFTTMTGSSSKQSSSIYDFTVKDIRGNDMDLSVYKGKVLLIVNVASQCGLTNSNYTELNEVYTKYKDQGLEILAFPCNQFGGQEPGDNAQIAEVACTRFKAEFPIFDKVEVNGNNAAPLYKFLKSSKGGLFGDGIKWNFTKFLVDKDGNVVERYAPTTSPLSIEKDVKKLLGIA*

Protein Length: 268

Fln nts: ATGGGGATCCTAGTTGATCCCGTCCGATATCCCTGTTCACACCTTAAACGCCGTTTTCCGACCTTTCTTGGCCCTCCTCTGATTCAGATCTATGCCCA_-_ATGCGGCCCAGCGTGCCTTCTAATCTTTCGCGTTCATTTTCTGTGGTACCTGTACTACAAGCCTTCCTATATAAACCCTTTACACCCTCTGTGATCCCTCGTGCCTTCCACTAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxTATCTTCCGACTTCGGTTCTCTGCTAATTTTACAACCATGACTGGGAGCTCATCAAAGCAGTCTTCCTCCATCTATGACTTCACAGTCAAAGACATCCGGGGTAATGATATGGATCTCAGCGTCTACAAGGGCAAGGTTTTGCTCATTGTCAACGTTGCCTCTCAATGTGGGTTGACTAACTCTAACTATACTGAGCTGAATGAAGTGTATACAAAGTACAAGGATCAAGGGTTAGAAATACTGGCTTTCCCATGCAACCAGTTTGGTGGACAAGAACCAGGTGATAATGCGCAGATTGCAGAAGTGGCCTGCACTCGCTTTAAAGCAGAGTTTCCCATATTTGACAAGGTCGAAGTTAATGGTAATAATGCAGCTCCTCTCTACAAGTTCTTGAAGTCAAGCAAAGGTGGGCTTTTTGGTGATGGAATAAAGTGGAACTTCACTAAGTTTCTGGTGGACAAAGATGGAAATGTTGTTGAACGATATGCACCCACTACGTCTCCATTGAGTATCGAGAAAGATGTCAAGAAACTGTTAGGAATTGCTTAA___TTCTTTGAAGGAGCAAACGTATGGTACACTTTCTGTTGCTAAAATAAAATAAGCAGCAATAATTTAGCTAGGCATTGTTCTAAGTTGCTGCACAAGGTTGAAGCAGACATTGTTATCACTTCAGCAGTTCATTAAATTGCACGTTGCTGTTGCATACGTACAATATTTTATTTGTTAAAAGTGCACGTTGCTGTTGCATGCATACAATATGTTATTTGTGATCTTTCAGATGCTTTCATCATCATCATAATGCTGACTATATTTTAATGCAATTTAAACTTCTTGAACTCTTATTACATGAAAAATACTGACATGTATCTTCTATATCCGTAACTTCTTGAAATCATATTGAAGAACATTACTTTGTCGGTTTC

Fln Alignment:

biogeco1_euler_13856___MRPSVPSNLSRSFSVVPVLQAFLYKPFTPSVIPRAFHYxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIFRLRFSANFTTMTGXXXXXXXXIYDFTVKDIRGNDMDLSVYKGKVLLIVNVASQCGLTNSNYTELNEVYTKYKDQGLEILAFPCNQFGGQEPGDNAQIAEVACTRFKAEFPIFDKVEVNGNNAAPLYKFLKSSKGGLFGDGIKWNFTKFLVDKDGNVVERYAPTTSPLSIEKDVKKLLGIA
A9NQB1_______________MQPCISSRLPRSFPAVPILQALLYKPLTPSIIPRAFHFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIFRVGFSANFTAMTGSSSKQSTSVYDFTVKDIRGNDVDLSIYKGKVLLIVNVASQCGLTNSNYNELNEVYTKYKDQGLEILAFPCNQFGEQEPGDNAQIAEVACTRFKAEFPIFDKVEVNGSNAAPIYKFLKSSKGGLLGNGIKWNFTKFLVDKDGNVVERYAPTTSPLSIEKNVKKLLGIA

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain