SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84440

Length: 2258 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

>sp_v2.0_unigene84440
TTTTGGTTCTCTGAGTTCCTTCCAGCGCTGTGCAGTCAGCTTTGCTGCGATTATTGTTCTATTTTTTGTTTTCTGAGCATTCAACGGTTTTCTATTTTGGAAAATGGCAAAGGGAGAAGGCCCCGCTATCGGAATCGATCTTGGAACCACATATTCCTGCGTAGGAGTGTGGCAACATGACCGAGTGGAGATTATTGCCAACGATCAGGGAAATCGGACCACTCCATCTTATGTAGCTTTCACCGACACAGAGCGGCTGATCGGAGATGCTGCCAAAAACAGTTTTCGATGCAAAGCGTCTTATTGGAAGGAGATTCTCCGATCCAACAGTCCAGAATGACATGAAGTTGTGGCCCTTCAAAGTCATTTCTGGGCCAGCGGAGAAGCCTATGATTGTTGTTACTTACAAAGGAGAAGAAAAGCAATTCGCTGCAGAGGAAATTTCTTCGATGGTTCTGACTAAAATGAAAGAGATTGCTGAAGCGTATCTTGGAACCACCATCAAGAATGCTGTTGTTACAGTCCCTGCATATTTCAATGACTCTCAGAGGCAGGCTACAAAGGATGCTGGCGTCATTTCTGGACTAAATGTGATGAGAATCATCAACGAACCAACTGCAGCTGCAATTGCTTATGGGCTGGACAAGAAGGCTAGCTCTGTTGGTGAGAAAAATGTTTTGATTTTTGATCTAGGAGGGGGGACTTTTGATGTTTCTCTATTAACTATTGAAGAGGGTATCTTTGAGGTCAAGGCCACGGCAGGAGATACCCATTTGGGTGGTGAAGACTTTGATAATCGGTTAGTTAACCATTTTACTCAGGAATTTAAAAGAAAATATAAGAAAGATCTCGGTAGCAGTGCAAGAGCCCTTAGGAGGTTGAGAACAGCCTGTGAAAGGGCTAAGAGAACGTTGTCTTCCACTGCTCAGACTACCATTGAGATTGATTCTTTGTACGAAGGAATTGATTTTTACTCCACCATTACTAGGGCTAGATTTGAGGAGCTCAACATGGATCTGTTTAGGAAATGCATGGAGCCTGTTGAGAAGTGTTTGAGGGATGCCAAGATGGATAAGAGCAGTGTTCATGATGTTGTGCTTGTGGGAGGATCTACCCGTATCCCTAAAGTGCAGCAATTGTTGCAGGATTTCTTCAATGGAAAGGAGCTCTGCAAGAGTATCAATCCCGATGAAGCTGTCGCTTATGGTGCTGCTGTTCAAGCTGCAATTCTAAGTGGAGAAGGAAATGAGAAGGTGCAAGACCTTTTGCTTCTTGACGTTACTCCCCTGTCACTAGGATTGGAAACTGCGGGAGGAGTGATGACTGTTTTGATCCCGAGGAACACAACGATTCCTACGAAAAAAGAACAAGTCTTCTCCACATACTCTGACAATCAGCCTGGTGTTTTGATCCAAGTATTTGAAGGTGAAAGAGCAAGAACTAAGGACAACAATCTTTTGGGTAAGTTTGAGTTGTCTGGTATCCCTCCTGCTCCAAGGGGTGTGCCTCAGATCACTGTTTGCTTTGACATTGATGCCAATGGTATCCTGAACGTCTCTGCTGAGGATAAAACGACTGGGCAGAAAAACAAGATCACCATTACCAATGACAAGGGCAGGCTAAGCAAGGATGAGATAGAAAAGATGGTTCAGGATGCAGAGAAATACAAGGCCGAGGATGAAGAACTGAAATTGAAGGTAGAAGCCAAAAATCTAGAGAACTATGCATACAACATGAGGAATACCATCAAAGATGATAAGATTGCAGGAAAGTTGGACCCTGCTGACAAGAAGAAAATCGAGGATGCAGTTGATGGAATTATCAGCTGGTTGGATGGAAACCAGTTGGCCGAGAAGGAAGAGTTTGAGGACAAATTGAAAGAGCTGGAGTCTACTTGCAATCCTATCATTGCAAAAATGTACCAGGGTGAAGGTGGTGCGGGATTTCCAGGTGCTGATGCTTTTGGTGGAGCTTCTGGAGCTGGCGACGAGGGTGCAAGTGGCCCTGGTCCCAAGATCGAGGAAGTGGACTAGATATATTTCTTCAGCACCTTCTATGTGTTTTTTTTGTTATTTCATTTGAATTGCTCGGGCTGGAATTTTAGAACTTTAAAATGTGGCCATTTTTGTCAGCCTCAGGATTGTTTCTCTTTGTAGTAGGTATGTAGTATTTTGAACTCTCTTATGCAGAGAGTCGTCAAACCGTATATTTCAACTGAAAGTGTTTTGTCATTTCAGAATATCTAGAAATATAATGCG

Ace file of the UniGene sp_v2.0_unigene84440 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Heat shock cognate 70 kDa protein n=7 Tax=Magnoliophyta RepID=HSP7C_PETHY	-	-	85%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	100%
Blast2go	heat shock protein 70	-	-	96%

Source	InterPros	Term	Type	Identity
Sma3	Heat shock protein Hsp70	IPR001023	-	-
Sma3	Chaperone DnaK	IPR012725	-	-
Sma3	Heat shock protein 70	IPR013126	-	-
Sma3	Heat shock protein 70, conserved site	IPR018181	-	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: B8LRY5

Fln msg: Warning!, your query overlaps and the subject is separated,

Fln protein: MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKxxVFDAKRLIGRRFSDPTVQNDMKLWPFKVISGPAEKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFTQEFKRKYKKDLGSSARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQDAEKYKAEDEELKLKVEAKNLENYAYNMRNTIKDDKIAGKLDPADKKKIEDAVDGIISWLDGNQLAEKEEFEDKLKELESTCNPIIAKMYQGEGGAGFPGADAFGGASGAGDEGASGPGPKIEEVD*

Protein Length: 645

Fln nts: TTTTGGTTCTCTGAGTTCCTTCCAGCGCTGTGCAGTCAGCTTTGCTGCGATTATTGTTCTATTTTTTGTTTTCTGAGCATTCAACGGTTTTCTATTTTGGAAA_-_ATGGCAAAGGGAGAAGGCCCCGCTATCGGAATCGATCTTGGAACCACATATTCCTGCGTAGGAGTGTGGCAACATGACCGAGTGGAGATTATTGCCAACGATCAGGGAAATCGGACCACTCCATCTTATGTAGCTTTCACCGACACAGAGCGGCTGATCGGAGATGCTGCCAAAxxxxxxGTTTTCGATGCAAAGCGTCTTATTGGAAGGAGATTCTCCGATCCAACAGTCCAGAATGACATGAAGTTGTGGCCCTTCAAAGTCATTTCTGGGCCAGCGGAGAAGCCTATGATTGTTGTTACTTACAAAGGAGAAGAAAAGCAATTCGCTGCAGAGGAAATTTCTTCGATGGTTCTGACTAAAATGAAAGAGATTGCTGAAGCGTATCTTGGAACCACCATCAAGAATGCTGTTGTTACAGTCCCTGCATATTTCAATGACTCTCAGAGGCAGGCTACAAAGGATGCTGGCGTCATTTCTGGACTAAATGTGATGAGAATCATCAACGAACCAACTGCAGCTGCAATTGCTTATGGGCTGGACAAGAAGGCTAGCTCTGTTGGTGAGAAAAATGTTTTGATTTTTGATCTAGGAGGGGGGACTTTTGATGTTTCTCTATTAACTATTGAAGAGGGTATCTTTGAGGTCAAGGCCACGGCAGGAGATACCCATTTGGGTGGTGAAGACTTTGATAATCGGTTAGTTAACCATTTTACTCAGGAATTTAAAAGAAAATATAAGAAAGATCTCGGTAGCAGTGCAAGAGCCCTTAGGAGGTTGAGAACAGCCTGTGAAAGGGCTAAGAGAACGTTGTCTTCCACTGCTCAGACTACCATTGAGATTGATTCTTTGTACGAAGGAATTGATTTTTACTCCACCATTACTAGGGCTAGATTTGAGGAGCTCAACATGGATCTGTTTAGGAAATGCATGGAGCCTGTTGAGAAGTGTTTGAGGGATGCCAAGATGGATAAGAGCAGTGTTCATGATGTTGTGCTTGTGGGAGGATCTACCCGTATCCCTAAAGTGCAGCAATTGTTGCAGGATTTCTTCAATGGAAAGGAGCTCTGCAAGAGTATCAATCCCGATGAAGCTGTCGCTTATGGTGCTGCTGTTCAAGCTGCAATTCTAAGTGGAGAAGGAAATGAGAAGGTGCAAGACCTTTTGCTTCTTGACGTTACTCCCCTGTCACTAGGATTGGAAACTGCGGGAGGAGTGATGACTGTTTTGATCCCGAGGAACACAACGATTCCTACGAAAAAAGAACAAGTCTTCTCCACATACTCTGACAATCAGCCTGGTGTTTTGATCCAAGTATTTGAAGGTGAAAGAGCAAGAACTAAGGACAACAATCTTTTGGGTAAGTTTGAGTTGTCTGGTATCCCTCCTGCTCCAAGGGGTGTGCCTCAGATCACTGTTTGCTTTGACATTGATGCCAATGGTATCCTGAACGTCTCTGCTGAGGATAAAACGACTGGGCAGAAAAACAAGATCACCATTACCAATGACAAGGGCAGGCTAAGCAAGGATGAGATAGAAAAGATGGTTCAGGATGCAGAGAAATACAAGGCCGAGGATGAAGAACTGAAATTGAAGGTAGAAGCCAAAAATCTAGAGAACTATGCATACAACATGAGGAATACCATCAAAGATGATAAGATTGCAGGAAAGTTGGACCCTGCTGACAAGAAGAAAATCGAGGATGCAGTTGATGGAATTATCAGCTGGTTGGATGGAAACCAGTTGGCCGAGAAGGAAGAGTTTGAGGACAAATTGAAAGAGCTGGAGTCTACTTGCAATCCTATCATTGCAAAAATGTACCAGGGTGAAGGTGGTGCGGGATTTCCAGGTGCTGATGCTTTTGGTGGAGCTTCTGGAGCTGGCGACGAGGGTGCAAGTGGCCCTGGTCCCAAGATCGAGGAAGTGGACTAG___ATATATTTCTTCAGCACCTTCTATGTGTTTTTTTTGTTATTTCATTTGAATTGCTCGGGCTGGAATTTTAGAACTTTAAAATGTGGCCATTTTTGTCAGCCTCAGGATTGTTTCTCTTTGTAGTAGGTATGTAGTATTTTGAACTCTCTTATGCAGAGAGTCGTCAAACCGTATATTTCAACTGAAAGTGTTTTGTCATTTCAGAATATCTAGAAATATAATGCG

Fln Alignment:

biogeco1_euler_4854___MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNxxxxxxxxTVFDAKRLIGRRFSDPTVQNDMKLWPFKVISGPAEKPMIVVTYKGEEKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFTQEFKRKYKKDLGXXXXXXXXXRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXAILSGEGNEKVQDXXXXXXXXXXXXLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQDAEKYKAEDEELKLKVEAKN-LENYAYNMRNTIKDDKIAGKLDPADKKKIEDAVDGIISWLDGNQXXXXXXXXXXXXXXESTCNPIIAKMYQXXXXXXXXXXXXXXXXXXXXXXXXXXXGPKIEEVD
B8LRY5_______________MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNxxxxxxxxTVFDAKRLIGRRFSDPTVQNDMKLWPFKVISGPAEKPMIVVSYKGEDKQFAAEEISSMVLTKMKEIAEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFTQEFKRKYKKDLSSSARALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTIHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQDAEKYKAEDEELKLKVEAKNSLENYAYNMRNTIRDDKIAGKLDPADKKKIEDAVDGIISWLDGNQLAEKEEFEDKLKELESTCNPIIAKMYQGEGGAGFPGADAFGGASGAGDESASGPGPKIEEVD

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain