SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84333

Length: 1694 nt

This UniGene was originaly assembled in antisense
ACE File: antisense
Fasta: sense

UniGene Fasta (sense)

Ace file of the UniGene sp_v2.0_unigene84333 (antisense)

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	MA3 domain-containing protein [Arabidopsis thaliana] ref\|NP_851255.1\| MA3 domain-containing protein [Arabidopsis thaliana] gb\|AAK64051.1\| putative topoisomerase [Arabidopsis thaliana] gb\|AAN13205.1\| putative topoisomerase [Arabidopsis thaliana] gb\|AED9771	-	-	60%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	26%
Blast2go	ma3 domain-containing protein	-	-	82%

Source	GOs	Term	Type	e value	Identity
Blast2go	protein binding	GO:0005515	Molecular Function	0.0	82%

Source	InterPros	Term	Type	Identity
Sma3	Oxidoreductase, molybdopterin-binding domain	IPR000572	-	-
Sma3	Initiation factor eIF-4 gamma, MA3	IPR003891	-	-
Sma3	Transketolase, N-terminal	IPR005474	-	-
Sma3	Methyltransferase type 11	IPR013216	-	-

Full-Lengther Next Prediction

Fln status: Putative C-terminus

Fln database: coniferopsida.fasta

Fln subject: D5AC81

Fln msg: STOP codon was not found. Distance to subject end: 164 aas, No stop codon before M and M found is too far from subject M, your sequence is longer than subject: 481 - 395

Fln protein: MDRHDREKEMAAVLLSSLYADVIEPEQVSKGFSKLLDSADDLALDIPEAVDILALFVARAVVDDILPPAFLTKTLKSLPEDSKGVEVIQKAEKSYLSAPLHAEIIERRWGGSTHITVEEVKKKISDLLNEYVESGDKVEACRCIRDLNVPFFHHEVVKRALILAMERRSAEPQILALLKESAEEGLITYSQMSKGFGRLADTVDDLSLDIINAKDMFESLVLKATTEGWLSPASVKSIPSEQNGPAEHDNARLFKERAVTIIQEYFLSDDIFEVVRSLEDLAAPDFNAIFVKKLITLAMDRKKREKEMASALLSALYTEVFPVEDIVNGFVLLLEAAEDTALDIPDAANELALFLARAVIDDILAPLNLEEINGQLKPGSIGSEIVRLARSLLAARLAGERILRCWGGGTGWAVEDAKDKINKLLEEFETGGGIREACQCIRDLNMPFFHHEVVKKALVMAMEKKNDRLLNLLQECSSEGL

Protein Length: 482

Fln nts: GGACTACTCGACACTGATGGGGATTTACACGTTGATCGCAATGACCCAAACTATGATAGTGAGGAGGAACCTTATCAATTGGTGGGTACAACTGTATCTCAGTCTTTGGAGGAATACAAGGGAAAAGTTGGATCAATAATAGAGGAATATTTTGCTACTGATGATGTGGCGGCAGCAGCTGCTGATCTTGCTGATCTTGGTTGTCCAAGCTATCACCATTATTTTGTTAAAAAACTTATCTCCTTGGCAATGGACAGGCATGACCGAGAAAAGGAGATGGCTGCAGTGCTGTTGTCTTCTTTGTACGCCGATGTGATTGAACCTGAGCAGGTTAGCAAAGGTTTTAGCAAATTGCTGGACTCAGCTGATGACTTGGCCTTGGATATCCCTGAAGCAGTAGATATTTTAGCATTATTTGTTGCTCGTGCAGTAGTTGATGATATACTTCCTCCAGCTTTTCTGACCAAAACCTTGAAATCTCTACCAGAGGATTCAAAGGGAGTTGAAGTAATTCAAAAGGCAGAGAAAAGCTATTTATCAGCTCCTCTTCATGCGGAGATTATTGAACGTCGATGGGGTGGCAGTACCCATATCACAGTAGAAGAAGTAAAAAAGAAGATAAGCGACTTGTTGAATGAGTATGTTGAGAGTGGTGACAAGGTAGAAGCTTGTCGTTGTATAAGAGATTTGAATGTTCCTTTCTTTCATCATGAAGTCGTAAAGAGGGCTTTAATTTTAGCCATGGAACGAAGAAGTGCAGAGCCACAGATCTTGGCTCTATTGAAAGAATCTGCTGAGGAGGGTCTAATAACATATAGTCAGATGTCGAAGGGTTTTGGTAGGCTTGCTGATACTGTAGATGATTTGTCACTTGACATAATCAATGCGAAGGACATGTTTGAATCTTTGGTTTTGAAGGCAACAACAGAGGGATGGCTTAGTCCAGCATCTGTTAAGTCCATCCCTAGTGAACAGAATGGACCTGCAGAGCATGATAATGCAAGGCTCTTCAAGGAGAGGGCAGTGACTATTATTCAAGAGTACTTCCTTTCTGATGATATCTTTGAAGTTGTGAGGAGCTTGGAAGATCTTGCTGCTCCTGATTTCAATGCAATTTTTGTTAAGAAGCTTATCACATTAGCTATGGACAGGAAGAAGAGGGAGAAAGAAATGGCTTCTGCCTTACTGTCTGCTCTCTATACAGAAGTATTTCCGGTTGAAGATATTGTGAATGGTTTTGTTTTGCTACTAGAGGCTGCTGAGGACACTGCATTAGACATACCTGATGCTGCAAATGAGCTAGCTCTTTTCCTGGCTAGAGCTGTTATAGATGATATTTTGGCTCCACTTAATTTGGAAGAAATTAACGGCCAGTTAAAGCCAGGATCTATTGGGAGTGAAATAGTGCGCTTGGCCCGTTCTCTCCTAGCTGCTCGCCTTGCTGGTGAACGTATTCTTAGGTGTTGGGGTGGTGGCACTGGTTGGGCAGTTGAAGATGCAAAAGACAAAATCAACAAGCTGTTAGAGGAATTTGAGACAGGAGGAGGTATTAGAGAAGCATGTCAATGTATTCGGGATCTTAATATGCCATTCTTTCACCATGAGGTTGTGAAGAAAGCTCTGGTTATGGCAATGGAGAAGAAAAATGATAGGCTGTTGAATTTGCTGCAGGAATGTTCAAGTGAAGGTTTGAT

Fln Alignment:

biogeco1_euler_2882___STHITVEEVKKKISDLLNEYVESGDKVEACRCIRDLNVPFFHHEVVKRALILAMERRSAEPQILALLKE---SAEEGLITYSQMSKGFGRLADTVDDLSLDIINAKDMFESLVLKATTEGWL
D5AC81_______________SSQLTEVQLRKKAEMAIHEYYSVRDIKEAALCVDDLKAPLFHPTMVSLWITDSFDRKDVEVDLLGNLLTYLCKTEPFLLNEEQLVEGLGTVLFSLEDTTVDAPKAPEFLGRILAKLVVEGIL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain