SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene84287

Length: 1234 nt

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene84287

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	24 kDa seed maturation protein n=1 Tax=Elaeis guineensis RepID=B3TLN1_ELAGV	-	-	53%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	83%
Blast2go	24 kda seed maturation protein	-	-	69%

Source	InterPros	Term	Type	e value	Identity
Sma3	Reticulon	IPR003388	-	0.0	-

Full-Lengther Next Prediction

Fln status: Complete

Fln database: coniferopsida.fasta

Fln subject: A9NQ37

Fln msg:

Fln protein: MADQQHSDESLMDKISEKLHKRSTSSSSSSDDEKPPVSHQPIKPVNRPVGGKKSVHKCLGGRKAADLFLWRDKKRSASILAGATVLWILFECMEYHFLTFVCHVLILSAAFLKRSPPHIPEIAIPEDAVHNLASELRFEVNRVFAVLHEVATGRDLKKYLLVVASLWFLSVIGSWCDFLSLAYIVLVVAHTVPFLYEKYQDQIDSFAHKVSLKAKEQYKVIDAKILKKIPRGPAKDKKHL*

Protein Length: 242

Fln nts: ATTTCACCAAGACTTAGTGCTTAAGAAAGAGCAGATATTAAATTGGGAATAAGCTCGTTCTCTCTTGAGAAGAAAGGCGGTTTGCGGTTTGATTTGATTTTGGAAGTCGCAGAAAACGAGCTACAGAG_-_ATGGCAGATCAACAGCATTCTGACGAGTCCCTTATGGACAAGATTTCTGAGAAATTGCATAAGCGTTCAACATCGTCTTCTTCGTCCTCAGATGACGAAAAACCCCCTGTTTCTCATCAGCCCATTAAACCCGTTAACAGACCTGTTGGAGGGAAGAAATCTGTGCATAAGTGTCTGGGTGGAAGAAAAGCCGCGGATTTGTTCTTGTGGAGGGATAAGAAAAGGTCTGCGAGCATTCTTGCTGGGGCCACTGTATTGTGGATCCTATTCGAATGCATGGAATATCACTTCTTGACATTTGTATGCCATGTGCTTATTCTCTCCGCCGCTTTCTTAAAGAGGTCCCCACCACATATACCAGAGATTGCGATTCCAGAGGATGCAGTTCACAATCTTGCCTCTGAACTTAGATTTGAAGTCAACAGAGTTTTTGCTGTTTTACATGAGGTTGCAACTGGTAGAGACTTGAAGAAATATCTATTGGTAGTTGCAAGTCTCTGGTTTCTCTCTGTTATTGGAAGCTGGTGTGATTTCCTGTCTCTTGCCTACATAGTGCTTGTTGTTGCACATACTGTTCCGTTTCTGTACGAGAAATATCAAGATCAGATCGATTCTTTTGCTCACAAAGTATCTCTGAAAGCCAAGGAGCAGTACAAAGTTATTGATGCTAAAATTTTAAAGAAGATCCCAAGGGGTCCGGCCAAAGATAAAAAACATTTGTAG___GGAGCGTCCTCTCTATGAGGCAAATTGTAGAGTAGTTTTTGAATTGTTAGATATCATGTTTTTTGGAGCCTTATTGCCGTGGTGATTGGCATCTGCCATGGTAATGCTCGGCTGGAATGAGTACAATTATGGTTTGTTATCTGGGTGCTAGTGCCCCAGAATTGAATCTCATTGTCCTGTTTATTCTGTATTTATTAGTTCTTATGTAATCATATCAGTCGCAGGCATTTTCTTAGATCTTAAAAGGTCTGTAATTATGTGATGTTTATGAATTAAGTATGAAATCCCTTTCAAGGTTTGCGGGTCCTTTCAAGAGGACGTTAATGTTTATGGCAAATGAGTAATATCTTATATTTTTCTTAGATCTTAAAAGGTCTGTAATT

Fln Alignment:

biogeco1_euler_2320___MADQQHSDESLMDKISEKLHKRXXXXXXXXDDEKPPVSHQPIKPVNRPVGGKKSVHKCLGGRKAADLFLWRDKKRSASILAGATVLWILFECMEYHFLTFVCHVLILS----------AAFLKRSPPHIPEIAIPEDAVHNLASELRFEVNRVFAVLHEVATGRDLKKYLLVVASLWFLSVIGSWCDFLSLAYIVLVVAHTVPFLYEKYQDQIDSFAHKVSLKAKEQYKVIDAKILKKIPRGPAKDKKHL
A9NQ37_______________MADNQHSEESIMDKISEKLHHRSSSSSSSSDDEKPPVSHH--QPVNRPSGGKKSVHKCLGGSKAADLILWRDKQRSASILAGATVLWILFKCMEYHFLTFVCHVLILSLAILFIWINSAAFLKRSPPHIPEIAISEVAIHNVASELRVEVNRAFSVLHEVATGRDFKKYLLVVAGLWFLSVIGSWCDFLTLAYIVLVVTHTVPVLYEKYQDQVDSFAHKATVKAKDQYKVIDAKILKKIPRGPLKDKKHL

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain