SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene83037

Length: 929 nt

Origin of reads: Biogeco1 v2 Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene83037

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	NSFL1 cofactor p47, putative n=1 Tax=Ricinus communis RepID=B9RXF0_RICCO	-	-	3.0e-34	50%
FL-Next	tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	88%
Blast2go	membrane trafficking factor	-	-	0.0	68%

Source	InterPros	Term	Type	Identity
Sma3	UBX	IPR001012	-	-
Sma3	Heat shock protein Hsp20	IPR002068	-	-
Sma3	Peptidase S24/S26A/S26B/S26C, beta-ribbon domain	IPR011056	-	-
Sma3	SEP domain	IPR012989	-	-
Sma3	Peptidase S24/S26A/S26B	IPR019759	-	-

Full-Lengther Next Prediction

SNPs (tot: 44)

Position	A %	C %	G %	T %	Probability
256	25		75		0.996473
278		85		14	0.993533
309		14		85	0.993533
312	85		14		0.993533
337	83		16		0.994512
338			85	14	0.993533
363		12	87		0.992554
367		12	12	75	0.975346
369		87	12		0.992554
372	87	12			0.992554
373			87	12	0.992554
377	87	12			0.992554
384	12			75	0.975346
386	87	12			0.992554
387			87	12	0.992554
389	12	87			0.992554
453	87		12		0.992556
457	87			12	0.992556
458		87	12		0.992556
461	87	12			0.992556
462	87			12	0.992556
464			14	85	0.993533
472		14		85	0.993533
477			83	16	0.994512
478		28		71	1.0
563		25		75	0.996479
565	75			25	0.996479
567	33		66		0.997452
569	75			25	0.996479
574	50		25	25	0.995533
576	50	25	25		0.995533
578	60	20			0.99255
579	50			50	1.0
583		25	50	25	0.995533
585	75			25	0.996473
586			60	20	0.99255
587		25	75		0.996473
588	50		25	25	0.995533
593			25	75	0.996473
594		25		75	0.996473
595	75	25			0.996473
597		25		75	0.996473
599		80		20	0.995496
600	25			75	0.996473

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain