SustainPineDB

All assemblies
Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene82694

Length: 589 nt

Origin of reads: Biogeco1 v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene82694

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	LP3-1 n=11 Tax=Pinus RepID=Q41087_PINTA	-	-	5.0e-19	71%
FL-Next	tr=LP3-1; Pinus taeda (Loblolly pine).	-	-	0.0	71%
Blast2go	water-stress inducible protein 3	-	-	8.52673e-19	83%

Source	InterPros	Term	Type	Identity
Sma3	Protein kinase, catalytic domain	IPR000719	-	-
Sma3	Legume lectin domain	IPR001220	-	-
Sma3	Plastocyanin-like	IPR003245	-	-
Sma3	ABA/WDS induced protein	IPR003496	-	-
Sma3	Serine/threonine-protein kinase, active site	IPR008271	-	-
Sma3	Cupredoxin	IPR008972	-	-
Sma3	Concanavalin A-like lectin/glucanase, subgroup	IPR013320	-	-
Sma3	Protein kinase, ATP binding site	IPR017441	-	-
Sma3		IPR017442	-	-

Full-Lengther Next Prediction

SNPs (tot: 1)

Position	A %	C %	G %	T %	Probability
61	25			75	0.99649

Back

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain