SustainPineDB

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Assembly info
Unigenes
SNPs
SSRs
Descriptions
GOs
ECs
KEGGs
InterPros
miRNAs

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene82520

Length: 586 nt

Origin of reads: Uagpf v2 Uma v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene82520

Annotations

Source	Descriptions	Term	Type	e value	Identity
AutoFact	plasma membrane protein 3 [Leymus chinensis]	-	-	7.0e-21	88%
FL-Next	tr=Low temprature induced-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).	-	-	0.0	91%
Blast2go	low temprature induced-like protein	-	-	1.28178e-31	94%

Source	InterPros	Term	Type	e value	Identity
Sma3	Proteolipid membrane potential modulator	IPR000612	-	0.0	-

Full-Lengther Next Prediction

SNPs (tot: 18)

Position	A %	C %	G %	T %	Probability
34	66	33			0.997461
35	66		33		0.997461
38			33	66	0.997461
42		33		66	0.997461
43	66	33			0.997461
56		33		66	0.997476
57	33		66		0.997476
76			25	75	0.996481
79	75		25		0.996481
84	75	25			0.996474
85		75		25	0.996481
90	66			33	0.997452
91		66	33		0.997452
94	33			66	0.997452
97		33		66	0.997452
98	33			66	0.997452
326	80		20		0.995498
404	66			33	0.997452

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain