SustainPineDB

Assembly Name: SustainPine v2.0

UniGene Name: sp_v2.0_unigene82250

Length: 769 nt

Origin of reads: Uagpf v2

UniGene Fasta

Ace file of the UniGene sp_v2.0_unigene82250

Annotations

Source	Descriptions	Term	Type	Identity
AutoFact	Organic cation transporter, putative n=1 Tax=Ricinus communis RepID=B9SY49_RICCO	-	-	51%
FL-Next	sp=Monosaccharide-sensing protein 1; Arabidopsis thaliana (Mouse-ear cress).	-	-	29%
Blast2go	protein	-	-	66%

Source	InterPros	Term	Type	Identity
Sma3	General substrate transporter	IPR005828	-	-
Sma3	Sugar transporter, conserved site	IPR005829	-	-
Sma3	Major facilitator superfamily	IPR011701	-	-

Full-Lengther Next Prediction

SNPs (tot: 52)

Position	A %	C %	G %	T %	Probability
146		33		66	0.997467
147	66		33		0.997461
149	66	33			0.997461
150			33	66	0.997461
156	66			33	0.997461
251			75	25	0.996476
253		75	25		0.996476
255			25	75	0.996476
256	25	75			0.996476
257		25		75	0.996476
259			75	25	0.996476
260		66		33	0.997452
261		66	33		0.997452
262		66	33		0.997452
263	66	33			0.997452
264	66			33	0.997452
265			33	66	0.997452
267		33		66	0.997452
269		33		66	0.997452
270		33	33	33	0.997753
271		33	66		0.997452
272	33		66		0.997452
324		20		80	0.995495
331		80	20		0.995495
333		20		80	0.9955
334		20		80	0.9955
341	75			25	0.996473
342		75	25		0.996473
345	66	33			0.997452
348		66		33	0.997452
350	33		66		0.997452
395			33	66	1.0
399			40	60	1.0
401			40	60	1.0
402	40	60			1.0
406		60		40	1.0
450			80	20	0.995493
481			14	85	0.993534
487	14	42	42		1.0
490	85			14	0.993534
493			16	83	0.994512
494	83	16			0.994512
498		16	83		0.994512
499	20	80			0.995493
502		16		83	0.994523
503	16			83	0.994523
534			83	16	0.994513
535	83			16	0.994513
539		16		83	0.994513
541		75		25	0.996473
542		50	50		1.0
642		33	66		0.997476

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain